Protein–RNA interactions for Protein: O94782

USP1, Ubiquitin carboxyl-terminal hydrolase 1, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP1O94782 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC17.34■□□□□ 0.37
USP1O94782 AC114341.1-201ENST00000618070 349 ntBASIC17.34■□□□□ 0.37
USP1O94782 BCL10-202ENST00000620248 774 ntTSL 5 BASIC17.34■□□□□ 0.37
USP1O94782 AC093458.2-201ENST00000623150 629 ntBASIC17.34■□□□□ 0.37
USP1O94782 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC17.34■□□□□ 0.37
USP1O94782 AL596257.1-201ENST00000641463 2694 ntBASIC17.34■□□□□ 0.37
USP1O94782 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
USP1O94782 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
USP1O94782 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
USP1O94782 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
USP1O94782 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
USP1O94782 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC17.33■□□□□ 0.37
USP1O94782 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
USP1O94782 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
USP1O94782 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
USP1O94782 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
USP1O94782 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC17.33■□□□□ 0.37
USP1O94782 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
USP1O94782 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
USP1O94782 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
USP1O94782 LINC02199-201ENST00000506655 2702 ntBASIC17.33■□□□□ 0.36
USP1O94782 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
USP1O94782 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC17.33■□□□□ 0.36
USP1O94782 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC17.33■□□□□ 0.36
USP1O94782 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
USP1O94782 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
USP1O94782 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
USP1O94782 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
USP1O94782 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
USP1O94782 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
USP1O94782 SRP19-202ENST00000445150 833 ntTSL 2 BASIC17.33■□□□□ 0.36
USP1O94782 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC17.33■□□□□ 0.36
USP1O94782 MIR3180-1-201ENST00000580374 94 ntBASIC17.33■□□□□ 0.36
USP1O94782 MIR3180-3-201ENST00000584616 94 ntBASIC17.33■□□□□ 0.36
USP1O94782 AP000867.4-201ENST00000641616 219 ntBASIC17.33■□□□□ 0.36
USP1O94782 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
USP1O94782 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC17.33■□□□□ 0.36
USP1O94782 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.36
USP1O94782 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
USP1O94782 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
USP1O94782 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
USP1O94782 CES3-203ENST00000543856 3178 ntTSL 2 BASIC17.33■□□□□ 0.36
USP1O94782 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
USP1O94782 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
USP1O94782 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
USP1O94782 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC17.33■□□□□ 0.36
USP1O94782 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
USP1O94782 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
USP1O94782 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
USP1O94782 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
USP1O94782 DOC2GP-204ENST00000639052 2548 ntBASIC17.32■□□□□ 0.36
USP1O94782 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
USP1O94782 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
USP1O94782 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC17.32■□□□□ 0.36
USP1O94782 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC17.32■□□□□ 0.36
USP1O94782 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
USP1O94782 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC17.32■□□□□ 0.36
USP1O94782 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
USP1O94782 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
USP1O94782 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
USP1O94782 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
USP1O94782 CA12-203ENST00000422263 2556 ntTSL 2 BASIC17.32■□□□□ 0.36
USP1O94782 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
USP1O94782 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
USP1O94782 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
USP1O94782 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
USP1O94782 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
USP1O94782 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
USP1O94782 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
USP1O94782 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
USP1O94782 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC17.32■□□□□ 0.36
USP1O94782 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC17.32■□□□□ 0.36
USP1O94782 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC17.32■□□□□ 0.36
USP1O94782 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC17.32■□□□□ 0.36
USP1O94782 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC17.32■□□□□ 0.36
USP1O94782 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
USP1O94782 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC17.32■□□□□ 0.36
USP1O94782 AC092329.2-201ENST00000598402 547 ntBASIC17.32■□□□□ 0.36
USP1O94782 NPAP1P7-201ENST00000613027 823 ntBASIC17.32■□□□□ 0.36
USP1O94782 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC17.32■□□□□ 0.36
USP1O94782 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC17.32■□□□□ 0.36
USP1O94782 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
USP1O94782 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC17.32■□□□□ 0.36
USP1O94782 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
USP1O94782 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
USP1O94782 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
USP1O94782 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.32■□□□□ 0.36
USP1O94782 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
USP1O94782 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC17.32■□□□□ 0.36
USP1O94782 AC078925.2-201ENST00000624013 1973 ntBASIC17.31■□□□□ 0.36
USP1O94782 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
USP1O94782 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
USP1O94782 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC17.31■□□□□ 0.36
USP1O94782 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
USP1O94782 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC17.31■□□□□ 0.36
USP1O94782 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
USP1O94782 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC17.31■□□□□ 0.36
USP1O94782 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
USP1O94782 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
USP1O94782 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms