Protein–RNA interactions for Protein: O75489

NDUFS3, NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3O75489 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC17.06■□□□□ 0.32
NDUFS3O75489 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NDUFS3O75489 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NDUFS3O75489 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NDUFS3O75489 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NDUFS3O75489 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NDUFS3O75489 NCF1C-201ENST00000438382 1427 ntBASIC17.05■□□□□ 0.32
NDUFS3O75489 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
NDUFS3O75489 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
NDUFS3O75489 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NDUFS3O75489 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
NDUFS3O75489 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
NDUFS3O75489 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NDUFS3O75489 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
NDUFS3O75489 AC106886.4-201ENST00000623557 2502 ntBASIC17.05■□□□□ 0.32
NDUFS3O75489 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC17.05■□□□□ 0.32
NDUFS3O75489 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC17.05■□□□□ 0.32
NDUFS3O75489 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NDUFS3O75489 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NDUFS3O75489 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
NDUFS3O75489 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NDUFS3O75489 IPPK-202ENST00000375522 882 ntTSL 3 BASIC17.05■□□□□ 0.32
NDUFS3O75489 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC17.05■□□□□ 0.32
NDUFS3O75489 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC17.05■□□□□ 0.32
NDUFS3O75489 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC17.05■□□□□ 0.32
NDUFS3O75489 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC17.05■□□□□ 0.32
NDUFS3O75489 SAPCD2P3-201ENST00000455031 850 ntBASIC17.05■□□□□ 0.32
NDUFS3O75489 FGFR3P6-201ENST00000457012 610 ntBASIC17.05■□□□□ 0.32
NDUFS3O75489 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC17.05■□□□□ 0.32
NDUFS3O75489 MSRA-206ENST00000521209 814 ntTSL 3 BASIC17.05■□□□□ 0.32
NDUFS3O75489 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
NDUFS3O75489 IRF8-202ENST00000562492 946 ntTSL 3 BASIC17.05■□□□□ 0.32
NDUFS3O75489 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC17.05■□□□□ 0.32
NDUFS3O75489 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC17.05■□□□□ 0.32
NDUFS3O75489 AC064862.7-201ENST00000604520 867 ntBASIC17.05■□□□□ 0.32
NDUFS3O75489 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NDUFS3O75489 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NDUFS3O75489 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NDUFS3O75489 AC105020.1-201ENST00000435356 2205 ntBASIC17.05■□□□□ 0.32
NDUFS3O75489 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
NDUFS3O75489 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NDUFS3O75489 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
NDUFS3O75489 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NDUFS3O75489 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
NDUFS3O75489 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
NDUFS3O75489 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
NDUFS3O75489 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
NDUFS3O75489 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NDUFS3O75489 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NDUFS3O75489 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
NDUFS3O75489 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NDUFS3O75489 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NDUFS3O75489 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
NDUFS3O75489 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
NDUFS3O75489 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
NDUFS3O75489 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC17.04■□□□□ 0.32
NDUFS3O75489 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
NDUFS3O75489 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
NDUFS3O75489 NABP1-203ENST00000409510 843 ntTSL 5 BASIC17.04■□□□□ 0.32
NDUFS3O75489 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC17.04■□□□□ 0.32
NDUFS3O75489 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC17.04■□□□□ 0.32
NDUFS3O75489 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC17.04■□□□□ 0.32
NDUFS3O75489 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC17.04■□□□□ 0.32
NDUFS3O75489 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC17.04■□□□□ 0.32
NDUFS3O75489 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC17.04■□□□□ 0.32
NDUFS3O75489 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC17.04■□□□□ 0.32
NDUFS3O75489 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC17.04■□□□□ 0.32
NDUFS3O75489 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
NDUFS3O75489 IFNL4P1-201ENST00000607083 540 ntBASIC17.04■□□□□ 0.32
NDUFS3O75489 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
NDUFS3O75489 AC011676.5-201ENST00000624864 2660 ntBASIC17.04■□□□□ 0.32
NDUFS3O75489 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
NDUFS3O75489 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
NDUFS3O75489 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NDUFS3O75489 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NDUFS3O75489 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
NDUFS3O75489 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NDUFS3O75489 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NDUFS3O75489 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NDUFS3O75489 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
NDUFS3O75489 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
NDUFS3O75489 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
NDUFS3O75489 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
NDUFS3O75489 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC17.04■□□□□ 0.32
NDUFS3O75489 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
NDUFS3O75489 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
NDUFS3O75489 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC17.04■□□□□ 0.32
NDUFS3O75489 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NDUFS3O75489 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
NDUFS3O75489 ACE-204ENST00000428043 5120 ntTSL 2 BASIC17.04■□□□□ 0.32
NDUFS3O75489 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
NDUFS3O75489 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC17.04■□□□□ 0.32
NDUFS3O75489 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
NDUFS3O75489 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
NDUFS3O75489 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NDUFS3O75489 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
NDUFS3O75489 FER1L4-210ENST00000615531 5998 ntBASIC17.03■□□□□ 0.32
NDUFS3O75489 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
NDUFS3O75489 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NDUFS3O75489 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms