Protein–RNA interactions for Protein: O75427

LRCH4, Leucine-rich repeat and calponin homology domain-containing protein 4, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH4O75427 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
LRCH4O75427 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LRCH4O75427 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
LRCH4O75427 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
LRCH4O75427 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC17.76■□□□□ 0.43
LRCH4O75427 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC17.76■□□□□ 0.43
LRCH4O75427 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LRCH4O75427 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC17.76■□□□□ 0.43
LRCH4O75427 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LRCH4O75427 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
LRCH4O75427 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
LRCH4O75427 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC17.76■□□□□ 0.43
LRCH4O75427 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
LRCH4O75427 LAGE3P1-201ENST00000425356 484 ntBASIC17.76■□□□□ 0.43
LRCH4O75427 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC17.76■□□□□ 0.43
LRCH4O75427 TOLLIP-AS1-201ENST00000530897 939 ntBASIC17.76■□□□□ 0.43
LRCH4O75427 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
LRCH4O75427 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
LRCH4O75427 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC17.76■□□□□ 0.43
LRCH4O75427 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
LRCH4O75427 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
LRCH4O75427 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LRCH4O75427 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC17.76■□□□□ 0.43
LRCH4O75427 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LRCH4O75427 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC17.76■□□□□ 0.43
LRCH4O75427 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC17.76■□□□□ 0.43
LRCH4O75427 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LRCH4O75427 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LRCH4O75427 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC17.76■□□□□ 0.43
LRCH4O75427 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC17.75■□□□□ 0.43
LRCH4O75427 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC17.75■□□□□ 0.43
LRCH4O75427 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC17.75■□□□□ 0.43
LRCH4O75427 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC17.75■□□□□ 0.43
LRCH4O75427 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LRCH4O75427 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC17.75■□□□□ 0.43
LRCH4O75427 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
LRCH4O75427 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LRCH4O75427 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LRCH4O75427 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.75■□□□□ 0.43
LRCH4O75427 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LRCH4O75427 PTCHD3P3-201ENST00000403073 906 ntBASIC17.75■□□□□ 0.43
LRCH4O75427 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC17.75■□□□□ 0.43
LRCH4O75427 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
LRCH4O75427 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
LRCH4O75427 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC17.75■□□□□ 0.43
LRCH4O75427 AL021920.2-201ENST00000624828 1351 ntBASIC17.75■□□□□ 0.43
LRCH4O75427 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
LRCH4O75427 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
LRCH4O75427 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LRCH4O75427 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
LRCH4O75427 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
LRCH4O75427 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LRCH4O75427 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LRCH4O75427 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC17.74■□□□□ 0.43
LRCH4O75427 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LRCH4O75427 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
LRCH4O75427 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
LRCH4O75427 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC17.74■□□□□ 0.43
LRCH4O75427 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC17.74■□□□□ 0.43
LRCH4O75427 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LRCH4O75427 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
LRCH4O75427 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
LRCH4O75427 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LRCH4O75427 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC17.74■□□□□ 0.43
LRCH4O75427 RPS2P1-201ENST00000434010 821 ntBASIC17.74■□□□□ 0.43
LRCH4O75427 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC17.74■□□□□ 0.43
LRCH4O75427 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
LRCH4O75427 AC006557.2-201ENST00000592985 1240 ntBASIC17.74■□□□□ 0.43
LRCH4O75427 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC17.74■□□□□ 0.43
LRCH4O75427 AL121912.1-201ENST00000603683 238 ntBASIC17.74■□□□□ 0.43
LRCH4O75427 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC17.74■□□□□ 0.43
LRCH4O75427 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
LRCH4O75427 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
LRCH4O75427 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LRCH4O75427 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LRCH4O75427 AL603756.1-201ENST00000606511 2163 ntBASIC17.74■□□□□ 0.43
LRCH4O75427 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC17.74■□□□□ 0.43
LRCH4O75427 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LRCH4O75427 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
LRCH4O75427 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
LRCH4O75427 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LRCH4O75427 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LRCH4O75427 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
LRCH4O75427 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC17.74■□□□□ 0.43
LRCH4O75427 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
LRCH4O75427 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
LRCH4O75427 KRT8P49-201ENST00000604166 1432 ntBASIC17.73■□□□□ 0.43
LRCH4O75427 UBALD1-205ENST00000590891 2641 ntBASIC17.73■□□□□ 0.43
LRCH4O75427 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
LRCH4O75427 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
LRCH4O75427 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LRCH4O75427 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LRCH4O75427 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LRCH4O75427 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC17.73■□□□□ 0.43
LRCH4O75427 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
LRCH4O75427 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
LRCH4O75427 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
LRCH4O75427 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LRCH4O75427 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC17.73■□□□□ 0.43
LRCH4O75427 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms