Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC16.46■□□□□ 0.22
CPNE3O75131 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CPNE3O75131 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CPNE3O75131 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CPNE3O75131 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
CPNE3O75131 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC16.45■□□□□ 0.22
CPNE3O75131 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CPNE3O75131 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC16.45■□□□□ 0.22
CPNE3O75131 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC16.45■□□□□ 0.22
CPNE3O75131 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CPNE3O75131 AP002414.1-201ENST00000391405 1147 ntBASIC16.45■□□□□ 0.22
CPNE3O75131 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CPNE3O75131 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CPNE3O75131 VN2R19P-201ENST00000442399 1052 ntBASIC16.45■□□□□ 0.22
CPNE3O75131 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC16.45■□□□□ 0.22
CPNE3O75131 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC16.45■□□□□ 0.22
CPNE3O75131 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC16.45■□□□□ 0.22
CPNE3O75131 AL353135.1-201ENST00000606729 504 ntBASIC16.45■□□□□ 0.22
CPNE3O75131 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
CPNE3O75131 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CPNE3O75131 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CPNE3O75131 HLA-DQB1-201ENST00000374943 1656 ntBASIC16.45■□□□□ 0.22
CPNE3O75131 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC16.45■□□□□ 0.22
CPNE3O75131 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC16.45■□□□□ 0.22
CPNE3O75131 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CPNE3O75131 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CPNE3O75131 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CPNE3O75131 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CPNE3O75131 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
CPNE3O75131 AL391005.1-201ENST00000623953 2435 ntBASIC16.45■□□□□ 0.22
CPNE3O75131 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC16.45■□□□□ 0.22
CPNE3O75131 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CPNE3O75131 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CPNE3O75131 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC16.45■□□□□ 0.22
CPNE3O75131 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC16.45■□□□□ 0.22
CPNE3O75131 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CPNE3O75131 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CPNE3O75131 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC16.45■□□□□ 0.22
CPNE3O75131 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CPNE3O75131 CROCCP1-201ENST00000426910 5675 ntBASIC16.44■□□□□ 0.22
CPNE3O75131 OR6D1P-203ENST00000641209 4860 ntBASIC16.44■□□□□ 0.22
CPNE3O75131 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CPNE3O75131 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CPNE3O75131 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CPNE3O75131 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CPNE3O75131 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CPNE3O75131 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC16.44■□□□□ 0.22
CPNE3O75131 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CPNE3O75131 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC16.44■□□□□ 0.22
CPNE3O75131 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CPNE3O75131 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CPNE3O75131 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC16.44■□□□□ 0.22
CPNE3O75131 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CPNE3O75131 RPSAP43-201ENST00000402237 625 ntBASIC16.44■□□□□ 0.22
CPNE3O75131 AC023274.1-201ENST00000418278 595 ntBASIC16.44■□□□□ 0.22
CPNE3O75131 CD63-210ENST00000550776 870 ntTSL 5 BASIC16.44■□□□□ 0.22
CPNE3O75131 MTDHP5-201ENST00000598980 586 ntBASIC16.44■□□□□ 0.22
CPNE3O75131 GGTLC5P-201ENST00000617623 998 ntBASIC16.44■□□□□ 0.22
CPNE3O75131 AL691403.2-201ENST00000618460 490 ntBASIC16.44■□□□□ 0.22
CPNE3O75131 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CPNE3O75131 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC16.44■□□□□ 0.22
CPNE3O75131 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
CPNE3O75131 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
CPNE3O75131 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
CPNE3O75131 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CPNE3O75131 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
CPNE3O75131 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC16.44■□□□□ 0.22
CPNE3O75131 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CPNE3O75131 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CPNE3O75131 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
CPNE3O75131 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CPNE3O75131 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC16.44■□□□□ 0.22
CPNE3O75131 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CPNE3O75131 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC16.43■□□□□ 0.22
CPNE3O75131 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC16.43■□□□□ 0.22
CPNE3O75131 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CPNE3O75131 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
CPNE3O75131 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CPNE3O75131 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CPNE3O75131 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CPNE3O75131 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
CPNE3O75131 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CPNE3O75131 AC002310.6-201ENST00000624451 1377 ntBASIC16.43■□□□□ 0.22
CPNE3O75131 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
CPNE3O75131 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
CPNE3O75131 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
CPNE3O75131 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CPNE3O75131 ENSA-206ENST00000361631 725 ntTSL 2 BASIC16.43■□□□□ 0.22
CPNE3O75131 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC16.43■□□□□ 0.22
CPNE3O75131 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
CPNE3O75131 MRPL20P1-201ENST00000400819 433 ntBASIC16.43■□□□□ 0.22
CPNE3O75131 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC16.43■□□□□ 0.22
CPNE3O75131 ACTG1P4-201ENST00000425123 1122 ntBASIC16.43■□□□□ 0.22
CPNE3O75131 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC16.43■□□□□ 0.22
CPNE3O75131 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC16.43■□□□□ 0.22
CPNE3O75131 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC16.43■□□□□ 0.22
CPNE3O75131 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC16.43■□□□□ 0.22
CPNE3O75131 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC16.43■□□□□ 0.22
CPNE3O75131 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC16.43■□□□□ 0.22
CPNE3O75131 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms