Protein–RNA interactions for Protein: O60245

PCDH7, Protocadherin-7, humanhuman

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH7O60245 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDH7O60245 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PCDH7O60245 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDH7O60245 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDH7O60245 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PCDH7O60245 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC16.33■□□□□ 0.2
PCDH7O60245 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC16.33■□□□□ 0.2
PCDH7O60245 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC16.33■□□□□ 0.2
PCDH7O60245 AC106795.1-205ENST00000512851 1056 ntBASIC16.33■□□□□ 0.2
PCDH7O60245 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC16.33■□□□□ 0.2
PCDH7O60245 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC16.33■□□□□ 0.2
PCDH7O60245 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC16.33■□□□□ 0.2
PCDH7O60245 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC16.33■□□□□ 0.2
PCDH7O60245 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PCDH7O60245 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC16.33■□□□□ 0.2
PCDH7O60245 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDH7O60245 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDH7O60245 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PCDH7O60245 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDH7O60245 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDH7O60245 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PCDH7O60245 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDH7O60245 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDH7O60245 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC16.33■□□□□ 0.2
PCDH7O60245 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDH7O60245 AC078925.2-201ENST00000624013 1973 ntBASIC16.33■□□□□ 0.2
PCDH7O60245 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDH7O60245 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC16.33■□□□□ 0.2
PCDH7O60245 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.2
PCDH7O60245 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDH7O60245 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDH7O60245 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
PCDH7O60245 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDH7O60245 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDH7O60245 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PCDH7O60245 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDH7O60245 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDH7O60245 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PCDH7O60245 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDH7O60245 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDH7O60245 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
PCDH7O60245 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDH7O60245 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC16.32■□□□□ 0.2
PCDH7O60245 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDH7O60245 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC16.32■□□□□ 0.2
PCDH7O60245 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC16.32■□□□□ 0.2
PCDH7O60245 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PCDH7O60245 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDH7O60245 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PCDH7O60245 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
PCDH7O60245 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
PCDH7O60245 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDH7O60245 RBM17P3-201ENST00000417687 1192 ntBASIC16.32■□□□□ 0.2
PCDH7O60245 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
PCDH7O60245 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC16.32■□□□□ 0.2
PCDH7O60245 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
PCDH7O60245 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC16.32■□□□□ 0.2
PCDH7O60245 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC16.32■□□□□ 0.2
PCDH7O60245 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
PCDH7O60245 AL121772.3-201ENST00000610840 674 ntBASIC16.32■□□□□ 0.2
PCDH7O60245 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
PCDH7O60245 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC16.32■□□□□ 0.2
PCDH7O60245 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC16.32■□□□□ 0.2
PCDH7O60245 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PCDH7O60245 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC16.32■□□□□ 0.2
PCDH7O60245 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PCDH7O60245 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDH7O60245 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
PCDH7O60245 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
PCDH7O60245 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDH7O60245 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PCDH7O60245 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDH7O60245 PCDHA14-201ENST00000506751 2298 ntBASIC16.31■□□□□ 0.2
PCDH7O60245 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
PCDH7O60245 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDH7O60245 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
PCDH7O60245 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDH7O60245 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDH7O60245 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PCDH7O60245 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDH7O60245 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.31■□□□□ 0.2
PCDH7O60245 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC16.31■□□□□ 0.2
PCDH7O60245 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
PCDH7O60245 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PCDH7O60245 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC16.31■□□□□ 0.2
PCDH7O60245 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDH7O60245 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDH7O60245 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
PCDH7O60245 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
PCDH7O60245 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PCDH7O60245 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDH7O60245 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PCDH7O60245 KRT18P31-201ENST00000506277 1292 ntBASIC16.31■□□□□ 0.2
PCDH7O60245 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC16.31■□□□□ 0.2
PCDH7O60245 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC16.31■□□□□ 0.2
PCDH7O60245 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC16.31■□□□□ 0.2
PCDH7O60245 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC16.31■□□□□ 0.2
PCDH7O60245 AL139288.1-201ENST00000623748 933 ntBASIC16.31■□□□□ 0.2
PCDH7O60245 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC16.31■□□□□ 0.2
PCDH7O60245 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms