Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC23.36■■□□□ 1.33
CHD2O14647 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
CHD2O14647 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC23.35■■□□□ 1.33
CHD2O14647 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC23.35■■□□□ 1.33
CHD2O14647 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
CHD2O14647 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC23.35■■□□□ 1.33
CHD2O14647 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
CHD2O14647 SRD5A3P1-201ENST00000603021 949 ntBASIC23.35■■□□□ 1.33
CHD2O14647 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC23.35■■□□□ 1.33
CHD2O14647 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
CHD2O14647 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC23.34■■□□□ 1.33
CHD2O14647 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
CHD2O14647 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
CHD2O14647 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC23.34■■□□□ 1.33
CHD2O14647 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC23.34■■□□□ 1.33
CHD2O14647 HIST1H2BPS3-201ENST00000419683 341 ntBASIC23.34■■□□□ 1.33
CHD2O14647 SLC25A6P5-201ENST00000435663 894 ntBASIC23.34■■□□□ 1.33
CHD2O14647 ELK1P1-201ENST00000485699 580 ntBASIC23.34■■□□□ 1.33
CHD2O14647 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC23.34■■□□□ 1.33
CHD2O14647 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
CHD2O14647 AC092552.1-201ENST00000547243 906 ntBASIC23.34■■□□□ 1.33
CHD2O14647 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC23.34■■□□□ 1.33
CHD2O14647 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC23.34■■□□□ 1.33
CHD2O14647 REXO1L6P-201ENST00000603433 1515 ntBASIC23.34■■□□□ 1.33
CHD2O14647 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
CHD2O14647 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
CHD2O14647 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC23.34■■□□□ 1.33
CHD2O14647 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC23.34■■□□□ 1.33
CHD2O14647 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC23.34■■□□□ 1.33
CHD2O14647 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
CHD2O14647 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
CHD2O14647 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC23.34■■□□□ 1.33
CHD2O14647 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC23.34■■□□□ 1.33
CHD2O14647 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
CHD2O14647 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC23.34■■□□□ 1.33
CHD2O14647 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
CHD2O14647 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC23.34■■□□□ 1.33
CHD2O14647 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC23.33■■□□□ 1.33
CHD2O14647 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC23.33■■□□□ 1.33
CHD2O14647 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC23.33■■□□□ 1.33
CHD2O14647 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC23.33■■□□□ 1.33
CHD2O14647 CTBP2P3-201ENST00000585629 1255 ntBASIC23.33■■□□□ 1.33
CHD2O14647 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
CHD2O14647 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.33
CHD2O14647 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC23.33■■□□□ 1.33
CHD2O14647 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC23.33■■□□□ 1.33
CHD2O14647 FRMD8P1-201ENST00000440433 1524 ntBASIC23.33■■□□□ 1.33
CHD2O14647 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC23.33■■□□□ 1.33
CHD2O14647 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC23.33■■□□□ 1.33
CHD2O14647 KRT8P12-202ENST00000472924 1397 ntBASIC23.33■■□□□ 1.32
CHD2O14647 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC23.33■■□□□ 1.32
CHD2O14647 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
CHD2O14647 RPF1-202ENST00000370656 724 ntTSL 2 BASIC23.33■■□□□ 1.32
CHD2O14647 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC23.33■■□□□ 1.32
CHD2O14647 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC23.33■■□□□ 1.32
CHD2O14647 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC23.33■■□□□ 1.32
CHD2O14647 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC23.33■■□□□ 1.32
CHD2O14647 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC23.33■■□□□ 1.32
CHD2O14647 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
CHD2O14647 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC23.33■■□□□ 1.32
CHD2O14647 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC23.33■■□□□ 1.32
CHD2O14647 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
CHD2O14647 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC23.33■■□□□ 1.32
CHD2O14647 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC23.33■■□□□ 1.32
CHD2O14647 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
CHD2O14647 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC23.32■■□□□ 1.32
CHD2O14647 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC23.32■■□□□ 1.32
CHD2O14647 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CHD2O14647 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CHD2O14647 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC23.32■■□□□ 1.32
CHD2O14647 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC23.32■■□□□ 1.32
CHD2O14647 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC23.32■■□□□ 1.32
CHD2O14647 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
CHD2O14647 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
CHD2O14647 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC23.32■■□□□ 1.32
CHD2O14647 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC23.32■■□□□ 1.32
CHD2O14647 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC23.32■■□□□ 1.32
CHD2O14647 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CHD2O14647 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
CHD2O14647 FTH1-202ENST00000526640 786 ntTSL 2 BASIC23.32■■□□□ 1.32
CHD2O14647 TPRX2P-201ENST00000535362 881 ntBASIC23.32■■□□□ 1.32
CHD2O14647 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC23.32■■□□□ 1.32
CHD2O14647 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC23.32■■□□□ 1.32
CHD2O14647 MPDU1-223ENST00000582151 728 ntBASIC23.32■■□□□ 1.32
CHD2O14647 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC23.32■■□□□ 1.32
CHD2O14647 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC23.32■■□□□ 1.32
CHD2O14647 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CHD2O14647 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CHD2O14647 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC23.32■■□□□ 1.32
CHD2O14647 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC23.32■■□□□ 1.32
CHD2O14647 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC23.32■■□□□ 1.32
CHD2O14647 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
CHD2O14647 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
CHD2O14647 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
CHD2O14647 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
CHD2O14647 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC23.31■■□□□ 1.32
CHD2O14647 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC23.31■■□□□ 1.32
CHD2O14647 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC23.31■■□□□ 1.32
CHD2O14647 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC23.31■■□□□ 1.32
CHD2O14647 MIR6775-201ENST00000617557 69 ntBASIC23.31■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms