Protein–RNA interactions for Protein: A6NHC0

CAPN8, Calpain-8, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN8A6NHC0 PMS2P2-201ENST00000425039 1128 ntBASIC17.38■□□□□ 0.37
CAPN8A6NHC0 RPS2P1-201ENST00000434010 821 ntBASIC17.38■□□□□ 0.37
CAPN8A6NHC0 HNRNPDP1-201ENST00000439535 754 ntBASIC17.38■□□□□ 0.37
CAPN8A6NHC0 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC17.38■□□□□ 0.37
CAPN8A6NHC0 OR7E14P-202ENST00000530490 1290 ntBASIC17.38■□□□□ 0.37
CAPN8A6NHC0 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC17.38■□□□□ 0.37
CAPN8A6NHC0 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
CAPN8A6NHC0 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
CAPN8A6NHC0 AC140113.2-201ENST00000604370 208 ntBASIC17.38■□□□□ 0.37
CAPN8A6NHC0 CAND2-206ENST00000626378 333 ntTSL 5 BASIC17.38■□□□□ 0.37
CAPN8A6NHC0 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC17.38■□□□□ 0.37
CAPN8A6NHC0 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
CAPN8A6NHC0 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
CAPN8A6NHC0 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC17.38■□□□□ 0.37
CAPN8A6NHC0 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CAPN8A6NHC0 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CAPN8A6NHC0 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
CAPN8A6NHC0 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
CAPN8A6NHC0 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC17.37■□□□□ 0.37
CAPN8A6NHC0 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CAPN8A6NHC0 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC17.37■□□□□ 0.37
CAPN8A6NHC0 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CAPN8A6NHC0 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CAPN8A6NHC0 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CAPN8A6NHC0 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CAPN8A6NHC0 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC17.37■□□□□ 0.37
CAPN8A6NHC0 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
CAPN8A6NHC0 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CAPN8A6NHC0 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CAPN8A6NHC0 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CAPN8A6NHC0 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CAPN8A6NHC0 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CAPN8A6NHC0 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
CAPN8A6NHC0 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CAPN8A6NHC0 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC17.37■□□□□ 0.37
CAPN8A6NHC0 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC17.37■□□□□ 0.37
CAPN8A6NHC0 LINC00982-205ENST00000420957 435 ntBASIC17.37■□□□□ 0.37
CAPN8A6NHC0 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC17.37■□□□□ 0.37
CAPN8A6NHC0 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC17.37■□□□□ 0.37
CAPN8A6NHC0 AC139887.3-201ENST00000568585 713 ntBASIC17.37■□□□□ 0.37
CAPN8A6NHC0 CYGB-205ENST00000590175 830 ntTSL 3 BASIC17.37■□□□□ 0.37
CAPN8A6NHC0 AL139424.1-201ENST00000607572 797 ntBASIC17.37■□□□□ 0.37
CAPN8A6NHC0 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC17.37■□□□□ 0.37
CAPN8A6NHC0 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC17.37■□□□□ 0.37
CAPN8A6NHC0 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CAPN8A6NHC0 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
CAPN8A6NHC0 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CAPN8A6NHC0 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CAPN8A6NHC0 PCDH8P1-201ENST00000428983 2773 ntBASIC17.37■□□□□ 0.37
CAPN8A6NHC0 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC17.37■□□□□ 0.37
CAPN8A6NHC0 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC17.37■□□□□ 0.37
CAPN8A6NHC0 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CAPN8A6NHC0 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CAPN8A6NHC0 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC17.37■□□□□ 0.37
CAPN8A6NHC0 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC17.37■□□□□ 0.37
CAPN8A6NHC0 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
CAPN8A6NHC0 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CAPN8A6NHC0 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CAPN8A6NHC0 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CAPN8A6NHC0 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CAPN8A6NHC0 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC17.36■□□□□ 0.37
CAPN8A6NHC0 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CAPN8A6NHC0 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CAPN8A6NHC0 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CAPN8A6NHC0 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CAPN8A6NHC0 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CAPN8A6NHC0 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
CAPN8A6NHC0 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CAPN8A6NHC0 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC17.36■□□□□ 0.37
CAPN8A6NHC0 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC17.36■□□□□ 0.37
CAPN8A6NHC0 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC17.36■□□□□ 0.37
CAPN8A6NHC0 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC17.36■□□□□ 0.37
CAPN8A6NHC0 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC17.36■□□□□ 0.37
CAPN8A6NHC0 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC17.36■□□□□ 0.37
CAPN8A6NHC0 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC17.36■□□□□ 0.37
CAPN8A6NHC0 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC17.36■□□□□ 0.37
CAPN8A6NHC0 AC106730.1-201ENST00000566722 1090 ntBASIC17.36■□□□□ 0.37
CAPN8A6NHC0 AL691403.2-201ENST00000618460 490 ntBASIC17.36■□□□□ 0.37
CAPN8A6NHC0 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CAPN8A6NHC0 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
CAPN8A6NHC0 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CAPN8A6NHC0 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
CAPN8A6NHC0 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CAPN8A6NHC0 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CAPN8A6NHC0 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CAPN8A6NHC0 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CAPN8A6NHC0 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
CAPN8A6NHC0 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CAPN8A6NHC0 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CAPN8A6NHC0 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.36■□□□□ 0.37
CAPN8A6NHC0 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC17.36■□□□□ 0.37
CAPN8A6NHC0 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC17.36■□□□□ 0.37
CAPN8A6NHC0 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
CAPN8A6NHC0 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
CAPN8A6NHC0 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CAPN8A6NHC0 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
CAPN8A6NHC0 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
CAPN8A6NHC0 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CAPN8A6NHC0 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CAPN8A6NHC0 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms