Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
LINC01546A6NGU7 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC12.05□□□□□ -0.48
LINC01546A6NGU7 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC12.05□□□□□ -0.48
LINC01546A6NGU7 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
LINC01546A6NGU7 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
LINC01546A6NGU7 AC006486.2-201ENST00000624246 2199 ntBASIC12.05□□□□□ -0.48
LINC01546A6NGU7 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
LINC01546A6NGU7 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
LINC01546A6NGU7 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
LINC01546A6NGU7 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
LINC01546A6NGU7 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
LINC01546A6NGU7 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
LINC01546A6NGU7 PRR31-201ENST00000371629 978 ntTSL 2 BASIC12.05□□□□□ -0.48
LINC01546A6NGU7 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
LINC01546A6NGU7 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC12.05□□□□□ -0.48
LINC01546A6NGU7 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC12.05□□□□□ -0.48
LINC01546A6NGU7 AC068472.1-201ENST00000474589 881 ntBASIC12.05□□□□□ -0.48
LINC01546A6NGU7 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC12.05□□□□□ -0.48
LINC01546A6NGU7 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
LINC01546A6NGU7 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC12.05□□□□□ -0.48
LINC01546A6NGU7 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC12.05□□□□□ -0.48
LINC01546A6NGU7 USF2-205ENST00000594064 1179 ntTSL 2 BASIC12.05□□□□□ -0.48
LINC01546A6NGU7 REXO1L10P-201ENST00000615707 1290 ntBASIC12.05□□□□□ -0.48
LINC01546A6NGU7 REXO1L12P-201ENST00000622156 912 ntBASIC12.05□□□□□ -0.48
LINC01546A6NGU7 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC12.05□□□□□ -0.48
LINC01546A6NGU7 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
LINC01546A6NGU7 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
LINC01546A6NGU7 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
LINC01546A6NGU7 LINC02447-202ENST00000501888 2146 ntBASIC12.05□□□□□ -0.48
LINC01546A6NGU7 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
LINC01546A6NGU7 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
LINC01546A6NGU7 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
LINC01546A6NGU7 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
LINC01546A6NGU7 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
LINC01546A6NGU7 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC12.05□□□□□ -0.48
LINC01546A6NGU7 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
LINC01546A6NGU7 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC12.05□□□□□ -0.48
LINC01546A6NGU7 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
LINC01546A6NGU7 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
LINC01546A6NGU7 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC12.05□□□□□ -0.48
LINC01546A6NGU7 AL049757.1-201ENST00000616842 1596 ntBASIC12.05□□□□□ -0.48
LINC01546A6NGU7 TCAF2P1-201ENST00000291129 2421 ntBASIC12.05□□□□□ -0.48
LINC01546A6NGU7 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC12.05□□□□□ -0.48
LINC01546A6NGU7 AL021920.2-201ENST00000624828 1351 ntBASIC12.05□□□□□ -0.48
LINC01546A6NGU7 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
LINC01546A6NGU7 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
LINC01546A6NGU7 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
LINC01546A6NGU7 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
LINC01546A6NGU7 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
LINC01546A6NGU7 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
LINC01546A6NGU7 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
LINC01546A6NGU7 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
LINC01546A6NGU7 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
LINC01546A6NGU7 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC12.04□□□□□ -0.48
LINC01546A6NGU7 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
LINC01546A6NGU7 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC12.04□□□□□ -0.48
LINC01546A6NGU7 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
LINC01546A6NGU7 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
LINC01546A6NGU7 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
LINC01546A6NGU7 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
LINC01546A6NGU7 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
LINC01546A6NGU7 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC12.04□□□□□ -0.48
LINC01546A6NGU7 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
LINC01546A6NGU7 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC12.04□□□□□ -0.48
LINC01546A6NGU7 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
LINC01546A6NGU7 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
LINC01546A6NGU7 SAPCD2P2-201ENST00000431719 1174 ntBASIC12.04□□□□□ -0.48
LINC01546A6NGU7 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC12.04□□□□□ -0.48
LINC01546A6NGU7 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC12.04□□□□□ -0.48
LINC01546A6NGU7 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC12.04□□□□□ -0.48
LINC01546A6NGU7 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC12.04□□□□□ -0.48
LINC01546A6NGU7 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC12.04□□□□□ -0.48
LINC01546A6NGU7 AC111152.3-201ENST00000569699 673 ntBASIC12.04□□□□□ -0.48
LINC01546A6NGU7 NT5C-210ENST00000582160 860 ntTSL 2 BASIC12.04□□□□□ -0.48
LINC01546A6NGU7 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
LINC01546A6NGU7 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
LINC01546A6NGU7 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC12.04□□□□□ -0.48
LINC01546A6NGU7 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
LINC01546A6NGU7 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC12.04□□□□□ -0.48
LINC01546A6NGU7 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
LINC01546A6NGU7 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC12.04□□□□□ -0.48
LINC01546A6NGU7 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
LINC01546A6NGU7 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
LINC01546A6NGU7 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC12.04□□□□□ -0.48
LINC01546A6NGU7 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC12.04□□□□□ -0.48
LINC01546A6NGU7 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
LINC01546A6NGU7 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
LINC01546A6NGU7 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC12.04□□□□□ -0.48
LINC01546A6NGU7 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
LINC01546A6NGU7 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
LINC01546A6NGU7 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
LINC01546A6NGU7 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
LINC01546A6NGU7 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
LINC01546A6NGU7 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC12.03□□□□□ -0.48
LINC01546A6NGU7 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC12.03□□□□□ -0.48
LINC01546A6NGU7 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
LINC01546A6NGU7 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
LINC01546A6NGU7 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC12.03□□□□□ -0.48
LINC01546A6NGU7 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
LINC01546A6NGU7 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC12.03□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms