Protein–RNA interactions for Protein: A0A576

TCRBV9S1A1T, T-cell receptor beta variable 3-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV9S1A1TA0A576 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TCRBV9S1A1TA0A576 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
TCRBV9S1A1TA0A576 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TCRBV9S1A1TA0A576 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC17.22■□□□□ 0.35
TCRBV9S1A1TA0A576 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC17.22■□□□□ 0.35
TCRBV9S1A1TA0A576 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC17.21■□□□□ 0.35
TCRBV9S1A1TA0A576 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC17.21■□□□□ 0.35
TCRBV9S1A1TA0A576 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TCRBV9S1A1TA0A576 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TCRBV9S1A1TA0A576 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC17.21■□□□□ 0.35
TCRBV9S1A1TA0A576 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
TCRBV9S1A1TA0A576 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
TCRBV9S1A1TA0A576 PCDHA1-201ENST00000378133 2726 ntBASIC17.21■□□□□ 0.35
TCRBV9S1A1TA0A576 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
TCRBV9S1A1TA0A576 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TCRBV9S1A1TA0A576 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
TCRBV9S1A1TA0A576 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TCRBV9S1A1TA0A576 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TCRBV9S1A1TA0A576 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC17.21■□□□□ 0.35
TCRBV9S1A1TA0A576 AMT-206ENST00000458307 1860 ntTSL 2 BASIC17.21■□□□□ 0.35
TCRBV9S1A1TA0A576 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
TCRBV9S1A1TA0A576 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TCRBV9S1A1TA0A576 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC17.21■□□□□ 0.35
TCRBV9S1A1TA0A576 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TCRBV9S1A1TA0A576 AC233702.3-201ENST00000578656 1387 ntBASIC17.21■□□□□ 0.35
TCRBV9S1A1TA0A576 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TCRBV9S1A1TA0A576 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
TCRBV9S1A1TA0A576 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TCRBV9S1A1TA0A576 AL031133.1-201ENST00000406807 723 ntBASIC17.21■□□□□ 0.35
TCRBV9S1A1TA0A576 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC17.21■□□□□ 0.35
TCRBV9S1A1TA0A576 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC17.21■□□□□ 0.35
TCRBV9S1A1TA0A576 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
TCRBV9S1A1TA0A576 PTK2-216ENST00000519881 863 ntTSL 3 BASIC17.21■□□□□ 0.35
TCRBV9S1A1TA0A576 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC17.21■□□□□ 0.35
TCRBV9S1A1TA0A576 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TCRBV9S1A1TA0A576 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC17.21■□□□□ 0.35
TCRBV9S1A1TA0A576 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TCRBV9S1A1TA0A576 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC17.21■□□□□ 0.35
TCRBV9S1A1TA0A576 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC17.21■□□□□ 0.35
TCRBV9S1A1TA0A576 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TCRBV9S1A1TA0A576 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TCRBV9S1A1TA0A576 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TCRBV9S1A1TA0A576 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
TCRBV9S1A1TA0A576 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TCRBV9S1A1TA0A576 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC17.21■□□□□ 0.35
TCRBV9S1A1TA0A576 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC17.21■□□□□ 0.34
TCRBV9S1A1TA0A576 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
TCRBV9S1A1TA0A576 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
TCRBV9S1A1TA0A576 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC17.21■□□□□ 0.34
TCRBV9S1A1TA0A576 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
TCRBV9S1A1TA0A576 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
TCRBV9S1A1TA0A576 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
TCRBV9S1A1TA0A576 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TCRBV9S1A1TA0A576 GCK-202ENST00000345378 2421 ntTSL 2 BASIC17.2■□□□□ 0.34
TCRBV9S1A1TA0A576 FRMD6-AS1-201ENST00000617151 2229 ntBASIC17.2■□□□□ 0.34
TCRBV9S1A1TA0A576 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TCRBV9S1A1TA0A576 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC17.2■□□□□ 0.34
TCRBV9S1A1TA0A576 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
TCRBV9S1A1TA0A576 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TCRBV9S1A1TA0A576 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TCRBV9S1A1TA0A576 ALOX12P2-203ENST00000570921 1945 ntBASIC17.2■□□□□ 0.34
TCRBV9S1A1TA0A576 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC17.2■□□□□ 0.34
TCRBV9S1A1TA0A576 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
TCRBV9S1A1TA0A576 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TCRBV9S1A1TA0A576 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC17.2■□□□□ 0.34
TCRBV9S1A1TA0A576 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TCRBV9S1A1TA0A576 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC17.2■□□□□ 0.34
TCRBV9S1A1TA0A576 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TCRBV9S1A1TA0A576 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC17.2■□□□□ 0.34
TCRBV9S1A1TA0A576 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC17.2■□□□□ 0.34
TCRBV9S1A1TA0A576 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TCRBV9S1A1TA0A576 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC17.2■□□□□ 0.34
TCRBV9S1A1TA0A576 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC17.2■□□□□ 0.34
TCRBV9S1A1TA0A576 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC17.2■□□□□ 0.34
TCRBV9S1A1TA0A576 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC17.2■□□□□ 0.34
TCRBV9S1A1TA0A576 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC17.2■□□□□ 0.34
TCRBV9S1A1TA0A576 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
TCRBV9S1A1TA0A576 AL121956.5-201ENST00000625261 221 ntBASIC17.2■□□□□ 0.34
TCRBV9S1A1TA0A576 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TCRBV9S1A1TA0A576 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
TCRBV9S1A1TA0A576 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
TCRBV9S1A1TA0A576 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TCRBV9S1A1TA0A576 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC17.2■□□□□ 0.34
TCRBV9S1A1TA0A576 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
TCRBV9S1A1TA0A576 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC17.2■□□□□ 0.34
TCRBV9S1A1TA0A576 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TCRBV9S1A1TA0A576 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC17.2■□□□□ 0.34
TCRBV9S1A1TA0A576 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC17.2■□□□□ 0.34
TCRBV9S1A1TA0A576 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC17.2■□□□□ 0.34
TCRBV9S1A1TA0A576 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC17.2■□□□□ 0.34
TCRBV9S1A1TA0A576 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC17.2■□□□□ 0.34
TCRBV9S1A1TA0A576 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TCRBV9S1A1TA0A576 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
TCRBV9S1A1TA0A576 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TCRBV9S1A1TA0A576 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
TCRBV9S1A1TA0A576 AC005332.1-201ENST00000577698 1310 ntBASIC17.2■□□□□ 0.34
TCRBV9S1A1TA0A576 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC17.2■□□□□ 0.34
TCRBV9S1A1TA0A576 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TCRBV9S1A1TA0A576 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
TCRBV9S1A1TA0A576 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms