Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CSNK1G3Q9Y6M4 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC16.72■□□□□ 0.27
CSNK1G3Q9Y6M4 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC16.72■□□□□ 0.27
CSNK1G3Q9Y6M4 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CSNK1G3Q9Y6M4 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
CSNK1G3Q9Y6M4 AC002056.1-201ENST00000395613 760 ntBASIC16.72■□□□□ 0.27
CSNK1G3Q9Y6M4 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CSNK1G3Q9Y6M4 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC16.72■□□□□ 0.27
CSNK1G3Q9Y6M4 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CSNK1G3Q9Y6M4 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
CSNK1G3Q9Y6M4 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CSNK1G3Q9Y6M4 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
CSNK1G3Q9Y6M4 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC16.72■□□□□ 0.27
CSNK1G3Q9Y6M4 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CSNK1G3Q9Y6M4 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CSNK1G3Q9Y6M4 RNF34-208ENST00000555076 593 ntTSL 3 BASIC16.72■□□□□ 0.27
CSNK1G3Q9Y6M4 RPL28-209ENST00000560055 670 ntTSL 3 BASIC16.72■□□□□ 0.27
CSNK1G3Q9Y6M4 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CSNK1G3Q9Y6M4 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC16.72■□□□□ 0.27
CSNK1G3Q9Y6M4 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC16.72■□□□□ 0.27
CSNK1G3Q9Y6M4 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC16.72■□□□□ 0.27
CSNK1G3Q9Y6M4 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CSNK1G3Q9Y6M4 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CSNK1G3Q9Y6M4 CYP51A1P2-201ENST00000419457 1499 ntBASIC16.72■□□□□ 0.27
CSNK1G3Q9Y6M4 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC16.72■□□□□ 0.27
CSNK1G3Q9Y6M4 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CSNK1G3Q9Y6M4 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CSNK1G3Q9Y6M4 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CSNK1G3Q9Y6M4 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC16.72■□□□□ 0.27
CSNK1G3Q9Y6M4 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC16.72■□□□□ 0.27
CSNK1G3Q9Y6M4 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
CSNK1G3Q9Y6M4 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC16.71■□□□□ 0.27
CSNK1G3Q9Y6M4 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CSNK1G3Q9Y6M4 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC16.71■□□□□ 0.27
CSNK1G3Q9Y6M4 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
CSNK1G3Q9Y6M4 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
CSNK1G3Q9Y6M4 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC16.71■□□□□ 0.27
CSNK1G3Q9Y6M4 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CSNK1G3Q9Y6M4 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
CSNK1G3Q9Y6M4 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CSNK1G3Q9Y6M4 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
CSNK1G3Q9Y6M4 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CSNK1G3Q9Y6M4 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC16.71■□□□□ 0.27
CSNK1G3Q9Y6M4 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CSNK1G3Q9Y6M4 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CSNK1G3Q9Y6M4 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CSNK1G3Q9Y6M4 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC16.71■□□□□ 0.27
CSNK1G3Q9Y6M4 TSEN15P1-201ENST00000423257 515 ntBASIC16.71■□□□□ 0.27
CSNK1G3Q9Y6M4 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC16.71■□□□□ 0.27
CSNK1G3Q9Y6M4 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC16.71■□□□□ 0.27
CSNK1G3Q9Y6M4 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
CSNK1G3Q9Y6M4 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC16.71■□□□□ 0.27
CSNK1G3Q9Y6M4 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC16.71■□□□□ 0.27
CSNK1G3Q9Y6M4 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC16.71■□□□□ 0.27
CSNK1G3Q9Y6M4 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC16.71■□□□□ 0.27
CSNK1G3Q9Y6M4 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC16.71■□□□□ 0.27
CSNK1G3Q9Y6M4 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
CSNK1G3Q9Y6M4 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
CSNK1G3Q9Y6M4 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC16.71■□□□□ 0.27
CSNK1G3Q9Y6M4 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CSNK1G3Q9Y6M4 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CSNK1G3Q9Y6M4 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CSNK1G3Q9Y6M4 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC16.71■□□□□ 0.27
CSNK1G3Q9Y6M4 LINC00304-203ENST00000565008 1864 ntBASIC16.71■□□□□ 0.27
CSNK1G3Q9Y6M4 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CSNK1G3Q9Y6M4 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
CSNK1G3Q9Y6M4 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC16.7■□□□□ 0.26
CSNK1G3Q9Y6M4 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC16.7■□□□□ 0.26
CSNK1G3Q9Y6M4 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC16.7■□□□□ 0.26
CSNK1G3Q9Y6M4 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CSNK1G3Q9Y6M4 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CSNK1G3Q9Y6M4 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CSNK1G3Q9Y6M4 EML3-212ENST00000494176 2901 ntTSL 2 BASIC16.7■□□□□ 0.26
CSNK1G3Q9Y6M4 EML3-216ENST00000529309 2909 ntTSL 2 BASIC16.7■□□□□ 0.26
CSNK1G3Q9Y6M4 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
CSNK1G3Q9Y6M4 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC16.7■□□□□ 0.26
CSNK1G3Q9Y6M4 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CSNK1G3Q9Y6M4 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
CSNK1G3Q9Y6M4 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CSNK1G3Q9Y6M4 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC16.7■□□□□ 0.26
CSNK1G3Q9Y6M4 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CSNK1G3Q9Y6M4 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
CSNK1G3Q9Y6M4 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC16.7■□□□□ 0.26
CSNK1G3Q9Y6M4 AC006116.8-202ENST00000587620 1550 ntBASIC16.7■□□□□ 0.26
CSNK1G3Q9Y6M4 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC16.7■□□□□ 0.26
CSNK1G3Q9Y6M4 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC16.7■□□□□ 0.26
CSNK1G3Q9Y6M4 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC16.7■□□□□ 0.26
CSNK1G3Q9Y6M4 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC16.7■□□□□ 0.26
CSNK1G3Q9Y6M4 ORC5-208ENST00000626700 344 ntTSL 3 BASIC16.7■□□□□ 0.26
CSNK1G3Q9Y6M4 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC16.7■□□□□ 0.26
CSNK1G3Q9Y6M4 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
CSNK1G3Q9Y6M4 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC16.7■□□□□ 0.26
CSNK1G3Q9Y6M4 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
CSNK1G3Q9Y6M4 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CSNK1G3Q9Y6M4 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CSNK1G3Q9Y6M4 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
CSNK1G3Q9Y6M4 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CSNK1G3Q9Y6M4 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
CSNK1G3Q9Y6M4 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC16.7■□□□□ 0.26
CSNK1G3Q9Y6M4 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms