Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC17.73■□□□□ 0.43
HCFC2Q9Y5Z7 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HCFC2Q9Y5Z7 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
HCFC2Q9Y5Z7 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
HCFC2Q9Y5Z7 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
HCFC2Q9Y5Z7 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC17.73■□□□□ 0.43
HCFC2Q9Y5Z7 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HCFC2Q9Y5Z7 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HCFC2Q9Y5Z7 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC17.73■□□□□ 0.43
HCFC2Q9Y5Z7 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC17.73■□□□□ 0.43
HCFC2Q9Y5Z7 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC17.73■□□□□ 0.43
HCFC2Q9Y5Z7 COQ6-210ENST00000554920 649 ntTSL 3 BASIC17.73■□□□□ 0.43
HCFC2Q9Y5Z7 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
HCFC2Q9Y5Z7 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC17.73■□□□□ 0.43
HCFC2Q9Y5Z7 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
HCFC2Q9Y5Z7 AC073592.8-201ENST00000624126 511 ntBASIC17.73■□□□□ 0.43
HCFC2Q9Y5Z7 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC17.73■□□□□ 0.43
HCFC2Q9Y5Z7 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC17.73■□□□□ 0.43
HCFC2Q9Y5Z7 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC17.73■□□□□ 0.43
HCFC2Q9Y5Z7 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
HCFC2Q9Y5Z7 TOP3BP1-201ENST00000420768 1380 ntBASIC17.73■□□□□ 0.43
HCFC2Q9Y5Z7 TDG-209ENST00000544861 1387 ntTSL 2 BASIC17.73■□□□□ 0.43
HCFC2Q9Y5Z7 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
HCFC2Q9Y5Z7 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HCFC2Q9Y5Z7 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HCFC2Q9Y5Z7 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HCFC2Q9Y5Z7 AL355312.1-201ENST00000407115 2176 ntBASIC17.73■□□□□ 0.43
HCFC2Q9Y5Z7 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
HCFC2Q9Y5Z7 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
HCFC2Q9Y5Z7 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC17.73■□□□□ 0.43
HCFC2Q9Y5Z7 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC17.73■□□□□ 0.43
HCFC2Q9Y5Z7 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
HCFC2Q9Y5Z7 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
HCFC2Q9Y5Z7 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
HCFC2Q9Y5Z7 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
HCFC2Q9Y5Z7 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HCFC2Q9Y5Z7 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
HCFC2Q9Y5Z7 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HCFC2Q9Y5Z7 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
HCFC2Q9Y5Z7 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HCFC2Q9Y5Z7 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HCFC2Q9Y5Z7 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
HCFC2Q9Y5Z7 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
HCFC2Q9Y5Z7 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HCFC2Q9Y5Z7 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HCFC2Q9Y5Z7 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC17.72■□□□□ 0.43
HCFC2Q9Y5Z7 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC17.72■□□□□ 0.43
HCFC2Q9Y5Z7 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
HCFC2Q9Y5Z7 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC17.72■□□□□ 0.43
HCFC2Q9Y5Z7 AC027369.6-201ENST00000525520 931 ntBASIC17.72■□□□□ 0.43
HCFC2Q9Y5Z7 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC17.72■□□□□ 0.43
HCFC2Q9Y5Z7 AC027307.3-201ENST00000594262 1100 ntBASIC17.72■□□□□ 0.43
HCFC2Q9Y5Z7 NKG7-205ENST00000600427 520 ntTSL 3 BASIC17.72■□□□□ 0.43
HCFC2Q9Y5Z7 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC17.72■□□□□ 0.43
HCFC2Q9Y5Z7 AL358472.5-202ENST00000641448 1267 ntBASIC17.72■□□□□ 0.43
HCFC2Q9Y5Z7 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC17.72■□□□□ 0.43
HCFC2Q9Y5Z7 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HCFC2Q9Y5Z7 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HCFC2Q9Y5Z7 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HCFC2Q9Y5Z7 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC17.72■□□□□ 0.43
HCFC2Q9Y5Z7 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HCFC2Q9Y5Z7 AC100757.3-201ENST00000622361 1406 ntBASIC17.72■□□□□ 0.43
HCFC2Q9Y5Z7 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
HCFC2Q9Y5Z7 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC17.71■□□□□ 0.43
HCFC2Q9Y5Z7 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HCFC2Q9Y5Z7 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HCFC2Q9Y5Z7 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HCFC2Q9Y5Z7 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC17.71■□□□□ 0.43
HCFC2Q9Y5Z7 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
HCFC2Q9Y5Z7 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HCFC2Q9Y5Z7 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.71■□□□□ 0.43
HCFC2Q9Y5Z7 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HCFC2Q9Y5Z7 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HCFC2Q9Y5Z7 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
HCFC2Q9Y5Z7 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
HCFC2Q9Y5Z7 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HCFC2Q9Y5Z7 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC17.71■□□□□ 0.43
HCFC2Q9Y5Z7 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC17.71■□□□□ 0.43
HCFC2Q9Y5Z7 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC17.71■□□□□ 0.43
HCFC2Q9Y5Z7 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC17.71■□□□□ 0.43
HCFC2Q9Y5Z7 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC17.71■□□□□ 0.43
HCFC2Q9Y5Z7 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC17.71■□□□□ 0.43
HCFC2Q9Y5Z7 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC17.71■□□□□ 0.43
HCFC2Q9Y5Z7 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC17.71■□□□□ 0.43
HCFC2Q9Y5Z7 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC17.71■□□□□ 0.43
HCFC2Q9Y5Z7 AL138918.1-201ENST00000568306 659 ntBASIC17.71■□□□□ 0.43
HCFC2Q9Y5Z7 SPDYE22P-201ENST00000582158 798 ntBASIC17.71■□□□□ 0.43
HCFC2Q9Y5Z7 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC17.71■□□□□ 0.43
HCFC2Q9Y5Z7 AC009118.2-201ENST00000613275 655 ntBASIC17.71■□□□□ 0.43
HCFC2Q9Y5Z7 AL590560.3-201ENST00000623350 461 ntBASIC17.71■□□□□ 0.43
HCFC2Q9Y5Z7 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HCFC2Q9Y5Z7 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HCFC2Q9Y5Z7 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
HCFC2Q9Y5Z7 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
HCFC2Q9Y5Z7 NARF-206ENST00000457415 1668 ntTSL 5 BASIC17.71■□□□□ 0.42
HCFC2Q9Y5Z7 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
HCFC2Q9Y5Z7 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HCFC2Q9Y5Z7 COMP-202ENST00000425807 2292 ntTSL 2 BASIC17.7■□□□□ 0.42
HCFC2Q9Y5Z7 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC17.7■□□□□ 0.42
HCFC2Q9Y5Z7 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms