Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC18.28■□□□□ 0.52
SNX9Q9Y5X1 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
SNX9Q9Y5X1 AC018845.2-201ENST00000568326 409 ntBASIC18.28■□□□□ 0.52
SNX9Q9Y5X1 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC18.28■□□□□ 0.52
SNX9Q9Y5X1 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SNX9Q9Y5X1 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
SNX9Q9Y5X1 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC18.28■□□□□ 0.52
SNX9Q9Y5X1 AC002310.6-201ENST00000624451 1377 ntBASIC18.28■□□□□ 0.52
SNX9Q9Y5X1 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
SNX9Q9Y5X1 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SNX9Q9Y5X1 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SNX9Q9Y5X1 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SNX9Q9Y5X1 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
SNX9Q9Y5X1 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SNX9Q9Y5X1 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SNX9Q9Y5X1 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SNX9Q9Y5X1 AL645608.8-201ENST00000606034 2086 ntBASIC18.27■□□□□ 0.52
SNX9Q9Y5X1 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
SNX9Q9Y5X1 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SNX9Q9Y5X1 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC18.27■□□□□ 0.52
SNX9Q9Y5X1 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SNX9Q9Y5X1 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.52
SNX9Q9Y5X1 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SNX9Q9Y5X1 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
SNX9Q9Y5X1 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SNX9Q9Y5X1 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
SNX9Q9Y5X1 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
SNX9Q9Y5X1 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
SNX9Q9Y5X1 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC18.27■□□□□ 0.52
SNX9Q9Y5X1 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC18.27■□□□□ 0.52
SNX9Q9Y5X1 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SNX9Q9Y5X1 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC18.27■□□□□ 0.52
SNX9Q9Y5X1 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SNX9Q9Y5X1 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC18.27■□□□□ 0.52
SNX9Q9Y5X1 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC18.27■□□□□ 0.52
SNX9Q9Y5X1 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SNX9Q9Y5X1 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC18.27■□□□□ 0.52
SNX9Q9Y5X1 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SNX9Q9Y5X1 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
SNX9Q9Y5X1 AC108860.2-201ENST00000562760 2183 ntBASIC18.27■□□□□ 0.51
SNX9Q9Y5X1 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
SNX9Q9Y5X1 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC18.27■□□□□ 0.51
SNX9Q9Y5X1 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SNX9Q9Y5X1 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC18.26■□□□□ 0.51
SNX9Q9Y5X1 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC18.26■□□□□ 0.51
SNX9Q9Y5X1 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SNX9Q9Y5X1 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SNX9Q9Y5X1 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SNX9Q9Y5X1 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
SNX9Q9Y5X1 AC092053.1-201ENST00000605787 1936 ntBASIC18.26■□□□□ 0.51
SNX9Q9Y5X1 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
SNX9Q9Y5X1 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SNX9Q9Y5X1 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SNX9Q9Y5X1 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SNX9Q9Y5X1 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SNX9Q9Y5X1 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC18.26■□□□□ 0.51
SNX9Q9Y5X1 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC18.26■□□□□ 0.51
SNX9Q9Y5X1 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC18.26■□□□□ 0.51
SNX9Q9Y5X1 CD63-210ENST00000550776 870 ntTSL 5 BASIC18.26■□□□□ 0.51
SNX9Q9Y5X1 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC18.26■□□□□ 0.51
SNX9Q9Y5X1 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC18.26■□□□□ 0.51
SNX9Q9Y5X1 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC18.26■□□□□ 0.51
SNX9Q9Y5X1 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SNX9Q9Y5X1 FRMD8P1-201ENST00000440433 1524 ntBASIC18.26■□□□□ 0.51
SNX9Q9Y5X1 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
SNX9Q9Y5X1 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SNX9Q9Y5X1 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
SNX9Q9Y5X1 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC18.26■□□□□ 0.51
SNX9Q9Y5X1 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC18.26■□□□□ 0.51
SNX9Q9Y5X1 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SNX9Q9Y5X1 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SNX9Q9Y5X1 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC18.26■□□□□ 0.51
SNX9Q9Y5X1 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SNX9Q9Y5X1 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SNX9Q9Y5X1 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SNX9Q9Y5X1 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SNX9Q9Y5X1 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SNX9Q9Y5X1 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SNX9Q9Y5X1 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
SNX9Q9Y5X1 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SNX9Q9Y5X1 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC18.25■□□□□ 0.51
SNX9Q9Y5X1 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SNX9Q9Y5X1 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SNX9Q9Y5X1 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
SNX9Q9Y5X1 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
SNX9Q9Y5X1 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SNX9Q9Y5X1 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC18.25■□□□□ 0.51
SNX9Q9Y5X1 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
SNX9Q9Y5X1 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SNX9Q9Y5X1 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SNX9Q9Y5X1 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SNX9Q9Y5X1 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
SNX9Q9Y5X1 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
SNX9Q9Y5X1 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC18.25■□□□□ 0.51
SNX9Q9Y5X1 CXCL1P1-201ENST00000502804 216 ntBASIC18.25■□□□□ 0.51
SNX9Q9Y5X1 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
SNX9Q9Y5X1 MAL2-202ENST00000531508 892 ntTSL 3 BASIC18.25■□□□□ 0.51
SNX9Q9Y5X1 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC18.25■□□□□ 0.51
SNX9Q9Y5X1 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC18.25■□□□□ 0.51
SNX9Q9Y5X1 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms