Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC16.52■□□□□ 0.24
PCDHGA6Q9Y5G7 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
PCDHGA6Q9Y5G7 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC16.52■□□□□ 0.24
PCDHGA6Q9Y5G7 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC16.52■□□□□ 0.24
PCDHGA6Q9Y5G7 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PCDHGA6Q9Y5G7 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC16.52■□□□□ 0.24
PCDHGA6Q9Y5G7 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC16.52■□□□□ 0.24
PCDHGA6Q9Y5G7 AC010327.4-202ENST00000591484 748 ntBASIC16.52■□□□□ 0.24
PCDHGA6Q9Y5G7 AC004706.3-202ENST00000621574 984 ntBASIC16.52■□□□□ 0.24
PCDHGA6Q9Y5G7 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
PCDHGA6Q9Y5G7 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
PCDHGA6Q9Y5G7 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
PCDHGA6Q9Y5G7 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC16.52■□□□□ 0.23
PCDHGA6Q9Y5G7 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
PCDHGA6Q9Y5G7 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
PCDHGA6Q9Y5G7 AC133963.1-201ENST00000504166 1679 ntBASIC16.52■□□□□ 0.23
PCDHGA6Q9Y5G7 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
PCDHGA6Q9Y5G7 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
PCDHGA6Q9Y5G7 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
PCDHGA6Q9Y5G7 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
PCDHGA6Q9Y5G7 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
PCDHGA6Q9Y5G7 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
PCDHGA6Q9Y5G7 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
PCDHGA6Q9Y5G7 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHGA6Q9Y5G7 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHGA6Q9Y5G7 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
PCDHGA6Q9Y5G7 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHGA6Q9Y5G7 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHGA6Q9Y5G7 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHGA6Q9Y5G7 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHGA6Q9Y5G7 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
PCDHGA6Q9Y5G7 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHGA6Q9Y5G7 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
PCDHGA6Q9Y5G7 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHGA6Q9Y5G7 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHGA6Q9Y5G7 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
PCDHGA6Q9Y5G7 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC16.51■□□□□ 0.23
PCDHGA6Q9Y5G7 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
PCDHGA6Q9Y5G7 METTL26-205ENST00000397666 726 ntTSL 2 BASIC16.51■□□□□ 0.23
PCDHGA6Q9Y5G7 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC16.51■□□□□ 0.23
PCDHGA6Q9Y5G7 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC16.51■□□□□ 0.23
PCDHGA6Q9Y5G7 HNRNPA1P28-201ENST00000424481 961 ntBASIC16.51■□□□□ 0.23
PCDHGA6Q9Y5G7 AC007967.2-201ENST00000432613 625 ntBASIC16.51■□□□□ 0.23
PCDHGA6Q9Y5G7 AC108751.1-201ENST00000490852 363 ntBASIC16.51■□□□□ 0.23
PCDHGA6Q9Y5G7 AC112482.1-201ENST00000492080 688 ntBASIC16.51■□□□□ 0.23
PCDHGA6Q9Y5G7 MTDHP5-201ENST00000598980 586 ntBASIC16.51■□□□□ 0.23
PCDHGA6Q9Y5G7 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC16.51■□□□□ 0.23
PCDHGA6Q9Y5G7 AC079781.4-201ENST00000641908 219 ntBASIC16.51■□□□□ 0.23
PCDHGA6Q9Y5G7 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHGA6Q9Y5G7 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHGA6Q9Y5G7 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHGA6Q9Y5G7 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHGA6Q9Y5G7 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC16.51■□□□□ 0.23
PCDHGA6Q9Y5G7 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHGA6Q9Y5G7 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHGA6Q9Y5G7 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHGA6Q9Y5G7 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC16.51■□□□□ 0.23
PCDHGA6Q9Y5G7 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
PCDHGA6Q9Y5G7 AL049757.1-201ENST00000616842 1596 ntBASIC16.51■□□□□ 0.23
PCDHGA6Q9Y5G7 AC004817.3-201ENST00000602957 2129 ntBASIC16.51■□□□□ 0.23
PCDHGA6Q9Y5G7 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHGA6Q9Y5G7 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC16.51■□□□□ 0.23
PCDHGA6Q9Y5G7 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC16.51■□□□□ 0.23
PCDHGA6Q9Y5G7 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHGA6Q9Y5G7 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC16.5■□□□□ 0.23
PCDHGA6Q9Y5G7 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHGA6Q9Y5G7 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHGA6Q9Y5G7 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHGA6Q9Y5G7 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHGA6Q9Y5G7 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHGA6Q9Y5G7 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHGA6Q9Y5G7 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHGA6Q9Y5G7 ADM-208ENST00000534464 1640 ntTSL 2 BASIC16.5■□□□□ 0.23
PCDHGA6Q9Y5G7 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHGA6Q9Y5G7 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHGA6Q9Y5G7 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHGA6Q9Y5G7 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC16.5■□□□□ 0.23
PCDHGA6Q9Y5G7 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
PCDHGA6Q9Y5G7 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
PCDHGA6Q9Y5G7 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC16.5■□□□□ 0.23
PCDHGA6Q9Y5G7 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC16.5■□□□□ 0.23
PCDHGA6Q9Y5G7 NKTR-203ENST00000442970 646 ntTSL 2 BASIC16.5■□□□□ 0.23
PCDHGA6Q9Y5G7 ARTN-206ENST00000472435 402 ntTSL 3 BASIC16.5■□□□□ 0.23
PCDHGA6Q9Y5G7 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC16.5■□□□□ 0.23
PCDHGA6Q9Y5G7 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC16.5■□□□□ 0.23
PCDHGA6Q9Y5G7 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC16.5■□□□□ 0.23
PCDHGA6Q9Y5G7 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC16.5■□□□□ 0.23
PCDHGA6Q9Y5G7 AC064836.3-201ENST00000607928 673 ntBASIC16.5■□□□□ 0.23
PCDHGA6Q9Y5G7 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC16.5■□□□□ 0.23
PCDHGA6Q9Y5G7 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHGA6Q9Y5G7 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.5■□□□□ 0.23
PCDHGA6Q9Y5G7 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHGA6Q9Y5G7 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHGA6Q9Y5G7 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC16.5■□□□□ 0.23
PCDHGA6Q9Y5G7 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHGA6Q9Y5G7 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHGA6Q9Y5G7 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHGA6Q9Y5G7 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
PCDHGA6Q9Y5G7 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHGA6Q9Y5G7 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms