Protein–RNA interactions for Protein: Q9Y5G5

PCDHGA8, Protocadherin gamma-A8, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA8Q9Y5G5 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHGA8Q9Y5G5 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHGA8Q9Y5G5 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHGA8Q9Y5G5 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC16.84■□□□□ 0.29
PCDHGA8Q9Y5G5 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC16.84■□□□□ 0.29
PCDHGA8Q9Y5G5 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
PCDHGA8Q9Y5G5 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHGA8Q9Y5G5 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHGA8Q9Y5G5 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHGA8Q9Y5G5 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC16.84■□□□□ 0.29
PCDHGA8Q9Y5G5 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHGA8Q9Y5G5 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHGA8Q9Y5G5 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHGA8Q9Y5G5 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.29
PCDHGA8Q9Y5G5 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
PCDHGA8Q9Y5G5 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
PCDHGA8Q9Y5G5 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC16.83■□□□□ 0.29
PCDHGA8Q9Y5G5 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDHGA8Q9Y5G5 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDHGA8Q9Y5G5 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PCDHGA8Q9Y5G5 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.83■□□□□ 0.28
PCDHGA8Q9Y5G5 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PCDHGA8Q9Y5G5 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDHGA8Q9Y5G5 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDHGA8Q9Y5G5 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PCDHGA8Q9Y5G5 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDHGA8Q9Y5G5 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDHGA8Q9Y5G5 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
PCDHGA8Q9Y5G5 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDHGA8Q9Y5G5 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
PCDHGA8Q9Y5G5 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
PCDHGA8Q9Y5G5 AC254562.1-201ENST00000417586 456 ntBASIC16.83■□□□□ 0.28
PCDHGA8Q9Y5G5 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC16.83■□□□□ 0.28
PCDHGA8Q9Y5G5 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC16.83■□□□□ 0.28
PCDHGA8Q9Y5G5 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDHGA8Q9Y5G5 SNHG9-202ENST00000564014 471 ntBASIC16.83■□□□□ 0.28
PCDHGA8Q9Y5G5 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC16.83■□□□□ 0.28
PCDHGA8Q9Y5G5 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC16.83■□□□□ 0.28
PCDHGA8Q9Y5G5 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC16.83■□□□□ 0.28
PCDHGA8Q9Y5G5 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PCDHGA8Q9Y5G5 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC16.83■□□□□ 0.28
PCDHGA8Q9Y5G5 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDHGA8Q9Y5G5 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC16.83■□□□□ 0.28
PCDHGA8Q9Y5G5 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDHGA8Q9Y5G5 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDHGA8Q9Y5G5 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC16.82■□□□□ 0.28
PCDHGA8Q9Y5G5 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC16.82■□□□□ 0.28
PCDHGA8Q9Y5G5 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
PCDHGA8Q9Y5G5 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC16.82■□□□□ 0.28
PCDHGA8Q9Y5G5 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHGA8Q9Y5G5 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHGA8Q9Y5G5 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHGA8Q9Y5G5 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHGA8Q9Y5G5 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHGA8Q9Y5G5 AC010460.3-201ENST00000511359 1579 ntBASIC16.82■□□□□ 0.28
PCDHGA8Q9Y5G5 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC16.82■□□□□ 0.28
PCDHGA8Q9Y5G5 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHGA8Q9Y5G5 KRT8P47-201ENST00000604727 1398 ntBASIC16.82■□□□□ 0.28
PCDHGA8Q9Y5G5 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHGA8Q9Y5G5 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC16.82■□□□□ 0.28
PCDHGA8Q9Y5G5 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHGA8Q9Y5G5 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC16.82■□□□□ 0.28
PCDHGA8Q9Y5G5 KRT18P2-201ENST00000447938 1258 ntBASIC16.82■□□□□ 0.28
PCDHGA8Q9Y5G5 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHGA8Q9Y5G5 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC16.82■□□□□ 0.28
PCDHGA8Q9Y5G5 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC16.82■□□□□ 0.28
PCDHGA8Q9Y5G5 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC16.82■□□□□ 0.28
PCDHGA8Q9Y5G5 AC004706.3-202ENST00000621574 984 ntBASIC16.82■□□□□ 0.28
PCDHGA8Q9Y5G5 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHGA8Q9Y5G5 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHGA8Q9Y5G5 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHGA8Q9Y5G5 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
PCDHGA8Q9Y5G5 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHGA8Q9Y5G5 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
PCDHGA8Q9Y5G5 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHGA8Q9Y5G5 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
PCDHGA8Q9Y5G5 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC16.82■□□□□ 0.28
PCDHGA8Q9Y5G5 SP100-208ENST00000427101 1922 ntTSL 2 BASIC16.82■□□□□ 0.28
PCDHGA8Q9Y5G5 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
PCDHGA8Q9Y5G5 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHGA8Q9Y5G5 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
PCDHGA8Q9Y5G5 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHGA8Q9Y5G5 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHGA8Q9Y5G5 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC16.81■□□□□ 0.28
PCDHGA8Q9Y5G5 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGA8Q9Y5G5 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGA8Q9Y5G5 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC16.81■□□□□ 0.28
PCDHGA8Q9Y5G5 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC16.81■□□□□ 0.28
PCDHGA8Q9Y5G5 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGA8Q9Y5G5 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGA8Q9Y5G5 AC004817.3-201ENST00000602957 2129 ntBASIC16.81■□□□□ 0.28
PCDHGA8Q9Y5G5 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC16.81■□□□□ 0.28
PCDHGA8Q9Y5G5 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGA8Q9Y5G5 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGA8Q9Y5G5 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGA8Q9Y5G5 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGA8Q9Y5G5 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
PCDHGA8Q9Y5G5 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC16.81■□□□□ 0.28
PCDHGA8Q9Y5G5 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
PCDHGA8Q9Y5G5 CRYGEP-201ENST00000412192 528 ntBASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms