Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC15.72■□□□□ 0.11
PCDHGB1Q9Y5G3 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
PCDHGB1Q9Y5G3 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCDHGB1Q9Y5G3 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCDHGB1Q9Y5G3 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC15.72■□□□□ 0.11
PCDHGB1Q9Y5G3 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCDHGB1Q9Y5G3 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC15.72■□□□□ 0.11
PCDHGB1Q9Y5G3 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PCDHGB1Q9Y5G3 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC15.72■□□□□ 0.11
PCDHGB1Q9Y5G3 ADM-208ENST00000534464 1640 ntTSL 2 BASIC15.72■□□□□ 0.11
PCDHGB1Q9Y5G3 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCDHGB1Q9Y5G3 AC099063.4-201ENST00000641099 1602 ntBASIC15.72■□□□□ 0.11
PCDHGB1Q9Y5G3 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC15.72■□□□□ 0.11
PCDHGB1Q9Y5G3 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
PCDHGB1Q9Y5G3 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCDHGB1Q9Y5G3 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCDHGB1Q9Y5G3 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCDHGB1Q9Y5G3 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
PCDHGB1Q9Y5G3 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
PCDHGB1Q9Y5G3 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
PCDHGB1Q9Y5G3 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
PCDHGB1Q9Y5G3 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
PCDHGB1Q9Y5G3 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PCDHGB1Q9Y5G3 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PCDHGB1Q9Y5G3 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
PCDHGB1Q9Y5G3 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
PCDHGB1Q9Y5G3 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PCDHGB1Q9Y5G3 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
PCDHGB1Q9Y5G3 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PCDHGB1Q9Y5G3 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC15.71■□□□□ 0.11
PCDHGB1Q9Y5G3 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC15.71■□□□□ 0.11
PCDHGB1Q9Y5G3 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC15.71■□□□□ 0.11
PCDHGB1Q9Y5G3 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC15.71■□□□□ 0.11
PCDHGB1Q9Y5G3 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC15.71■□□□□ 0.11
PCDHGB1Q9Y5G3 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC15.71■□□□□ 0.11
PCDHGB1Q9Y5G3 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
PCDHGB1Q9Y5G3 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC15.71■□□□□ 0.11
PCDHGB1Q9Y5G3 AC009154.2-201ENST00000621177 724 ntBASIC15.71■□□□□ 0.11
PCDHGB1Q9Y5G3 AC010947.1-201ENST00000623454 693 ntBASIC15.71■□□□□ 0.11
PCDHGB1Q9Y5G3 AC092364.2-201ENST00000596710 2692 ntBASIC15.71■□□□□ 0.11
PCDHGB1Q9Y5G3 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PCDHGB1Q9Y5G3 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC15.71■□□□□ 0.11
PCDHGB1Q9Y5G3 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PCDHGB1Q9Y5G3 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PCDHGB1Q9Y5G3 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
PCDHGB1Q9Y5G3 VILL-207ENST00000465644 1857 ntTSL 5 BASIC15.71■□□□□ 0.11
PCDHGB1Q9Y5G3 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC15.71■□□□□ 0.1
PCDHGB1Q9Y5G3 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
PCDHGB1Q9Y5G3 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC15.71■□□□□ 0.1
PCDHGB1Q9Y5G3 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
PCDHGB1Q9Y5G3 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
PCDHGB1Q9Y5G3 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
PCDHGB1Q9Y5G3 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
PCDHGB1Q9Y5G3 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHGB1Q9Y5G3 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHGB1Q9Y5G3 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
PCDHGB1Q9Y5G3 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHGB1Q9Y5G3 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC15.7■□□□□ 0.1
PCDHGB1Q9Y5G3 AC073508.3-201ENST00000619697 1419 ntBASIC15.7■□□□□ 0.1
PCDHGB1Q9Y5G3 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC15.7■□□□□ 0.1
PCDHGB1Q9Y5G3 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC15.7■□□□□ 0.1
PCDHGB1Q9Y5G3 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
PCDHGB1Q9Y5G3 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
PCDHGB1Q9Y5G3 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHGB1Q9Y5G3 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHGB1Q9Y5G3 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHGB1Q9Y5G3 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC15.7■□□□□ 0.1
PCDHGB1Q9Y5G3 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
PCDHGB1Q9Y5G3 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHGB1Q9Y5G3 NT5C-210ENST00000582160 860 ntTSL 2 BASIC15.7■□□□□ 0.1
PCDHGB1Q9Y5G3 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
PCDHGB1Q9Y5G3 USF2-205ENST00000594064 1179 ntTSL 2 BASIC15.7■□□□□ 0.1
PCDHGB1Q9Y5G3 GXYLT1P4-201ENST00000613576 1192 ntBASIC15.7■□□□□ 0.1
PCDHGB1Q9Y5G3 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
PCDHGB1Q9Y5G3 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHGB1Q9Y5G3 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHGB1Q9Y5G3 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHGB1Q9Y5G3 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHGB1Q9Y5G3 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC15.7■□□□□ 0.1
PCDHGB1Q9Y5G3 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHGB1Q9Y5G3 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
PCDHGB1Q9Y5G3 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHGB1Q9Y5G3 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC15.7■□□□□ 0.1
PCDHGB1Q9Y5G3 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHGB1Q9Y5G3 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC15.69■□□□□ 0.1
PCDHGB1Q9Y5G3 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PCDHGB1Q9Y5G3 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PCDHGB1Q9Y5G3 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC15.69■□□□□ 0.1
PCDHGB1Q9Y5G3 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
PCDHGB1Q9Y5G3 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PCDHGB1Q9Y5G3 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
PCDHGB1Q9Y5G3 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PCDHGB1Q9Y5G3 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
PCDHGB1Q9Y5G3 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PCDHGB1Q9Y5G3 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
PCDHGB1Q9Y5G3 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PCDHGB1Q9Y5G3 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PCDHGB1Q9Y5G3 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
PCDHGB1Q9Y5G3 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PCDHGB1Q9Y5G3 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 63.9 ms