Protein–RNA interactions for Protein: Q9Y252

RNF6, E3 ubiquitin-protein ligase RNF6, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6Q9Y252 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RNF6Q9Y252 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
RNF6Q9Y252 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
RNF6Q9Y252 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
RNF6Q9Y252 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
RNF6Q9Y252 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
RNF6Q9Y252 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RNF6Q9Y252 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
RNF6Q9Y252 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC16.16■□□□□ 0.18
RNF6Q9Y252 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
RNF6Q9Y252 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RNF6Q9Y252 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RNF6Q9Y252 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC16.16■□□□□ 0.18
RNF6Q9Y252 AL590627.1-203ENST00000421194 1026 ntBASIC16.16■□□□□ 0.18
RNF6Q9Y252 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC16.16■□□□□ 0.18
RNF6Q9Y252 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC16.16■□□□□ 0.18
RNF6Q9Y252 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RNF6Q9Y252 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC16.16■□□□□ 0.18
RNF6Q9Y252 BNIP3P18-201ENST00000593976 575 ntBASIC16.16■□□□□ 0.18
RNF6Q9Y252 AL591684.3-201ENST00000605187 298 ntBASIC16.16■□□□□ 0.18
RNF6Q9Y252 AC116407.2-201ENST00000613639 860 ntBASIC16.16■□□□□ 0.18
RNF6Q9Y252 TP73-AS1-207ENST00000624167 988 ntBASIC16.16■□□□□ 0.18
RNF6Q9Y252 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RNF6Q9Y252 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RNF6Q9Y252 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RNF6Q9Y252 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RNF6Q9Y252 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC16.16■□□□□ 0.18
RNF6Q9Y252 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RNF6Q9Y252 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
RNF6Q9Y252 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RNF6Q9Y252 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
RNF6Q9Y252 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
RNF6Q9Y252 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC16.15■□□□□ 0.18
RNF6Q9Y252 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
RNF6Q9Y252 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RNF6Q9Y252 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RNF6Q9Y252 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC16.15■□□□□ 0.18
RNF6Q9Y252 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RNF6Q9Y252 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RNF6Q9Y252 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RNF6Q9Y252 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC16.15■□□□□ 0.18
RNF6Q9Y252 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RNF6Q9Y252 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RNF6Q9Y252 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RNF6Q9Y252 TEX30-205ENST00000376029 959 ntTSL 2 BASIC16.15■□□□□ 0.18
RNF6Q9Y252 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC16.15■□□□□ 0.18
RNF6Q9Y252 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC16.15■□□□□ 0.18
RNF6Q9Y252 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RNF6Q9Y252 DDT-203ENST00000403754 569 ntTSL 3 BASIC16.15■□□□□ 0.18
RNF6Q9Y252 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RNF6Q9Y252 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RNF6Q9Y252 DDT-206ENST00000430101 573 ntTSL 2 BASIC16.15■□□□□ 0.18
RNF6Q9Y252 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RNF6Q9Y252 PPIE-208ENST00000470213 927 ntTSL 3 BASIC16.15■□□□□ 0.18
RNF6Q9Y252 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC16.15■□□□□ 0.18
RNF6Q9Y252 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RNF6Q9Y252 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
RNF6Q9Y252 MOK-208ENST00000519058 917 ntTSL 2 BASIC16.15■□□□□ 0.18
RNF6Q9Y252 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC16.15■□□□□ 0.18
RNF6Q9Y252 AP001005.1-201ENST00000571755 1248 ntBASIC16.15■□□□□ 0.18
RNF6Q9Y252 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
RNF6Q9Y252 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
RNF6Q9Y252 AC005915.1-201ENST00000624912 2018 ntBASIC16.15■□□□□ 0.18
RNF6Q9Y252 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RNF6Q9Y252 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RNF6Q9Y252 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RNF6Q9Y252 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC16.15■□□□□ 0.18
RNF6Q9Y252 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC16.15■□□□□ 0.18
RNF6Q9Y252 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC16.15■□□□□ 0.18
RNF6Q9Y252 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
RNF6Q9Y252 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
RNF6Q9Y252 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
RNF6Q9Y252 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.15■□□□□ 0.18
RNF6Q9Y252 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RNF6Q9Y252 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
RNF6Q9Y252 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.18
RNF6Q9Y252 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
RNF6Q9Y252 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC16.14■□□□□ 0.17
RNF6Q9Y252 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RNF6Q9Y252 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RNF6Q9Y252 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RNF6Q9Y252 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.14■□□□□ 0.17
RNF6Q9Y252 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RNF6Q9Y252 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC16.14■□□□□ 0.17
RNF6Q9Y252 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC16.14■□□□□ 0.17
RNF6Q9Y252 AC016396.2-201ENST00000562575 1417 ntBASIC16.14■□□□□ 0.17
RNF6Q9Y252 EMD-201ENST00000369835 966 ntTSL 3 BASIC16.14■□□□□ 0.17
RNF6Q9Y252 FAM197Y8-203ENST00000450145 560 ntBASIC16.14■□□□□ 0.17
RNF6Q9Y252 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC16.14■□□□□ 0.17
RNF6Q9Y252 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC16.14■□□□□ 0.17
RNF6Q9Y252 AC096582.2-201ENST00000510860 516 ntBASIC16.14■□□□□ 0.17
RNF6Q9Y252 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
RNF6Q9Y252 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC16.14■□□□□ 0.17
RNF6Q9Y252 MIR5100-201ENST00000579544 119 ntBASIC16.14■□□□□ 0.17
RNF6Q9Y252 AC006538.3-201ENST00000612495 578 ntBASIC16.14■□□□□ 0.17
RNF6Q9Y252 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
RNF6Q9Y252 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RNF6Q9Y252 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC16.14■□□□□ 0.17
RNF6Q9Y252 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RNF6Q9Y252 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms