Protein–RNA interactions for Protein: Q9UMX0

UBQLN1, Ubiquilin-1, humanhuman

Known RBP Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1Q9UMX0 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
UBQLN1Q9UMX0 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
UBQLN1Q9UMX0 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
UBQLN1Q9UMX0 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
UBQLN1Q9UMX0 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
UBQLN1Q9UMX0 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC18.28■□□□□ 0.52
UBQLN1Q9UMX0 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
UBQLN1Q9UMX0 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
UBQLN1Q9UMX0 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
UBQLN1Q9UMX0 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
UBQLN1Q9UMX0 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC18.28■□□□□ 0.52
UBQLN1Q9UMX0 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
UBQLN1Q9UMX0 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC18.28■□□□□ 0.52
UBQLN1Q9UMX0 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC18.28■□□□□ 0.52
UBQLN1Q9UMX0 DHDH-204ENST00000523250 634 ntTSL 5 BASIC18.28■□□□□ 0.52
UBQLN1Q9UMX0 RPL28-209ENST00000560055 670 ntTSL 3 BASIC18.28■□□□□ 0.52
UBQLN1Q9UMX0 AC005829.1-201ENST00000570002 483 ntBASIC18.28■□□□□ 0.52
UBQLN1Q9UMX0 AC068137.2-201ENST00000605408 478 ntBASIC18.28■□□□□ 0.52
UBQLN1Q9UMX0 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC18.28■□□□□ 0.52
UBQLN1Q9UMX0 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
UBQLN1Q9UMX0 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
UBQLN1Q9UMX0 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
UBQLN1Q9UMX0 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
UBQLN1Q9UMX0 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
UBQLN1Q9UMX0 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
UBQLN1Q9UMX0 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
UBQLN1Q9UMX0 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
UBQLN1Q9UMX0 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC18.28■□□□□ 0.52
UBQLN1Q9UMX0 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
UBQLN1Q9UMX0 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
UBQLN1Q9UMX0 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
UBQLN1Q9UMX0 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC18.27■□□□□ 0.52
UBQLN1Q9UMX0 AL353732.1-201ENST00000569618 1459 ntBASIC18.27■□□□□ 0.52
UBQLN1Q9UMX0 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
UBQLN1Q9UMX0 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
UBQLN1Q9UMX0 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
UBQLN1Q9UMX0 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC18.27■□□□□ 0.52
UBQLN1Q9UMX0 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC18.27■□□□□ 0.52
UBQLN1Q9UMX0 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC18.27■□□□□ 0.52
UBQLN1Q9UMX0 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
UBQLN1Q9UMX0 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
UBQLN1Q9UMX0 FALEC-201ENST00000416894 566 ntTSL 3 BASIC18.27■□□□□ 0.52
UBQLN1Q9UMX0 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
UBQLN1Q9UMX0 MKNK2P1-201ENST00000437526 628 ntBASIC18.27■□□□□ 0.52
UBQLN1Q9UMX0 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC18.27■□□□□ 0.52
UBQLN1Q9UMX0 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC18.27■□□□□ 0.52
UBQLN1Q9UMX0 ALG1L5P-201ENST00000482043 771 ntBASIC18.27■□□□□ 0.52
UBQLN1Q9UMX0 AL031432.2-201ENST00000566714 459 ntBASIC18.27■□□□□ 0.52
UBQLN1Q9UMX0 AL928711.1-201ENST00000570165 459 ntBASIC18.27■□□□□ 0.52
UBQLN1Q9UMX0 MIR4515-201ENST00000584082 81 ntBASIC18.27■□□□□ 0.52
UBQLN1Q9UMX0 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC18.27■□□□□ 0.52
UBQLN1Q9UMX0 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC18.27■□□□□ 0.52
UBQLN1Q9UMX0 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
UBQLN1Q9UMX0 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
UBQLN1Q9UMX0 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
UBQLN1Q9UMX0 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
UBQLN1Q9UMX0 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
UBQLN1Q9UMX0 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
UBQLN1Q9UMX0 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
UBQLN1Q9UMX0 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC18.27■□□□□ 0.51
UBQLN1Q9UMX0 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
UBQLN1Q9UMX0 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
UBQLN1Q9UMX0 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
UBQLN1Q9UMX0 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
UBQLN1Q9UMX0 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC18.27■□□□□ 0.51
UBQLN1Q9UMX0 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
UBQLN1Q9UMX0 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
UBQLN1Q9UMX0 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
UBQLN1Q9UMX0 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC18.27■□□□□ 0.51
UBQLN1Q9UMX0 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
UBQLN1Q9UMX0 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
UBQLN1Q9UMX0 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
UBQLN1Q9UMX0 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
UBQLN1Q9UMX0 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
UBQLN1Q9UMX0 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
UBQLN1Q9UMX0 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
UBQLN1Q9UMX0 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
UBQLN1Q9UMX0 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
UBQLN1Q9UMX0 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC18.26■□□□□ 0.51
UBQLN1Q9UMX0 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
UBQLN1Q9UMX0 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
UBQLN1Q9UMX0 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
UBQLN1Q9UMX0 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
UBQLN1Q9UMX0 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
UBQLN1Q9UMX0 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
UBQLN1Q9UMX0 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
UBQLN1Q9UMX0 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC18.26■□□□□ 0.51
UBQLN1Q9UMX0 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC18.26■□□□□ 0.51
UBQLN1Q9UMX0 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC18.26■□□□□ 0.51
UBQLN1Q9UMX0 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC18.26■□□□□ 0.51
UBQLN1Q9UMX0 AC091167.2-201ENST00000579581 588 ntBASIC18.26■□□□□ 0.51
UBQLN1Q9UMX0 AC055717.3-201ENST00000622967 595 ntBASIC18.26■□□□□ 0.51
UBQLN1Q9UMX0 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
UBQLN1Q9UMX0 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
UBQLN1Q9UMX0 HARS-203ENST00000431330 1774 ntTSL 2 BASIC18.26■□□□□ 0.51
UBQLN1Q9UMX0 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
UBQLN1Q9UMX0 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
UBQLN1Q9UMX0 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC18.26■□□□□ 0.51
UBQLN1Q9UMX0 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
UBQLN1Q9UMX0 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms