Protein–RNA interactions for Protein: Q9UK58

CCNL1, Cyclin-L1, humanhuman

Predicted RBP Predictions only

Length 526 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1Q9UK58 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CCNL1Q9UK58 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC21.52■■□□□ 1.04
CCNL1Q9UK58 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC21.52■■□□□ 1.04
CCNL1Q9UK58 AC131009.4-201ENST00000624048 1740 ntBASIC21.52■■□□□ 1.03
CCNL1Q9UK58 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CCNL1Q9UK58 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC21.51■■□□□ 1.03
CCNL1Q9UK58 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CCNL1Q9UK58 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
CCNL1Q9UK58 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC21.51■■□□□ 1.03
CCNL1Q9UK58 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CCNL1Q9UK58 AC138028.4-201ENST00000564984 1845 ntBASIC21.51■■□□□ 1.03
CCNL1Q9UK58 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CCNL1Q9UK58 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
CCNL1Q9UK58 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC21.51■■□□□ 1.03
CCNL1Q9UK58 MIR1909-201ENST00000411312 80 ntBASIC21.51■■□□□ 1.03
CCNL1Q9UK58 RPS2P32-201ENST00000439199 892 ntBASIC21.51■■□□□ 1.03
CCNL1Q9UK58 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC21.51■■□□□ 1.03
CCNL1Q9UK58 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC21.51■■□□□ 1.03
CCNL1Q9UK58 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CCNL1Q9UK58 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC21.51■■□□□ 1.03
CCNL1Q9UK58 POLE2-203ENST00000553805 496 ntTSL 2 BASIC21.51■■□□□ 1.03
CCNL1Q9UK58 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CCNL1Q9UK58 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC21.51■■□□□ 1.03
CCNL1Q9UK58 FOXO1B-201ENST00000504678 1527 ntBASIC21.5■■□□□ 1.03
CCNL1Q9UK58 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CCNL1Q9UK58 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
CCNL1Q9UK58 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC21.5■■□□□ 1.03
CCNL1Q9UK58 CETN4P-206ENST00000642099 2168 ntBASIC21.5■■□□□ 1.03
CCNL1Q9UK58 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
CCNL1Q9UK58 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CCNL1Q9UK58 HLA-H-201ENST00000383620 1096 ntBASIC21.5■■□□□ 1.03
CCNL1Q9UK58 RPL37AP1-201ENST00000412502 279 ntBASIC21.5■■□□□ 1.03
CCNL1Q9UK58 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC21.5■■□□□ 1.03
CCNL1Q9UK58 MTND6P24-201ENST00000440466 518 ntBASIC21.5■■□□□ 1.03
CCNL1Q9UK58 GNAQP1-201ENST00000444815 1067 ntBASIC21.5■■□□□ 1.03
CCNL1Q9UK58 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CCNL1Q9UK58 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC21.5■■□□□ 1.03
CCNL1Q9UK58 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC21.5■■□□□ 1.03
CCNL1Q9UK58 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC21.5■■□□□ 1.03
CCNL1Q9UK58 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CCNL1Q9UK58 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC21.5■■□□□ 1.03
CCNL1Q9UK58 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC21.5■■□□□ 1.03
CCNL1Q9UK58 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC21.5■■□□□ 1.03
CCNL1Q9UK58 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
CCNL1Q9UK58 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CCNL1Q9UK58 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CCNL1Q9UK58 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CCNL1Q9UK58 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
CCNL1Q9UK58 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
CCNL1Q9UK58 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CCNL1Q9UK58 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CCNL1Q9UK58 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CCNL1Q9UK58 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
CCNL1Q9UK58 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CCNL1Q9UK58 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
CCNL1Q9UK58 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC21.49■■□□□ 1.03
CCNL1Q9UK58 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CCNL1Q9UK58 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CCNL1Q9UK58 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CCNL1Q9UK58 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC21.49■■□□□ 1.03
CCNL1Q9UK58 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
CCNL1Q9UK58 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CCNL1Q9UK58 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
CCNL1Q9UK58 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
CCNL1Q9UK58 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CCNL1Q9UK58 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
CCNL1Q9UK58 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CCNL1Q9UK58 AC079776.1-201ENST00000401540 1152 ntBASIC21.49■■□□□ 1.03
CCNL1Q9UK58 AL512384.1-201ENST00000406683 331 ntBASIC21.49■■□□□ 1.03
CCNL1Q9UK58 AP006294.1-201ENST00000415407 339 ntBASIC21.49■■□□□ 1.03
CCNL1Q9UK58 AL353705.2-201ENST00000428243 662 ntBASIC21.49■■□□□ 1.03
CCNL1Q9UK58 ACA64.2-201ENST00000459014 129 ntBASIC21.49■■□□□ 1.03
CCNL1Q9UK58 RN7SL752P-201ENST00000463779 287 ntBASIC21.49■■□□□ 1.03
CCNL1Q9UK58 KRT18P34-201ENST00000488218 1270 ntBASIC21.49■■□□□ 1.03
CCNL1Q9UK58 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC21.49■■□□□ 1.03
CCNL1Q9UK58 AC132938.2-201ENST00000579188 680 ntBASIC21.49■■□□□ 1.03
CCNL1Q9UK58 MPDU1-223ENST00000582151 728 ntBASIC21.49■■□□□ 1.03
CCNL1Q9UK58 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC21.49■■□□□ 1.03
CCNL1Q9UK58 AL589739.1-201ENST00000607720 493 ntBASIC21.49■■□□□ 1.03
CCNL1Q9UK58 AC021097.1-201ENST00000607902 574 ntBASIC21.49■■□□□ 1.03
CCNL1Q9UK58 AL591163.1-201ENST00000641757 987 ntBASIC21.49■■□□□ 1.03
CCNL1Q9UK58 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC21.49■■□□□ 1.03
CCNL1Q9UK58 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC21.49■■□□□ 1.03
CCNL1Q9UK58 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CCNL1Q9UK58 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
CCNL1Q9UK58 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CCNL1Q9UK58 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CCNL1Q9UK58 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CCNL1Q9UK58 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
CCNL1Q9UK58 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC21.48■■□□□ 1.03
CCNL1Q9UK58 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC21.48■■□□□ 1.03
CCNL1Q9UK58 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC21.48■■□□□ 1.03
CCNL1Q9UK58 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC21.48■■□□□ 1.03
CCNL1Q9UK58 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
CCNL1Q9UK58 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CCNL1Q9UK58 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CCNL1Q9UK58 CDK2AP2P3-201ENST00000422476 372 ntBASIC21.48■■□□□ 1.03
CCNL1Q9UK58 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC21.48■■□□□ 1.03
CCNL1Q9UK58 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC21.48■■□□□ 1.03
CCNL1Q9UK58 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms