Protein–RNA interactions for Protein: Q9UH73

EBF1, Transcription factor COE1, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1Q9UH73 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
EBF1Q9UH73 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
EBF1Q9UH73 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
EBF1Q9UH73 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
EBF1Q9UH73 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
EBF1Q9UH73 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
EBF1Q9UH73 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
EBF1Q9UH73 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
EBF1Q9UH73 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
EBF1Q9UH73 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
EBF1Q9UH73 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
EBF1Q9UH73 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
EBF1Q9UH73 PI4KAP1-204ENST00000612579 1703 ntBASIC17.42■□□□□ 0.38
EBF1Q9UH73 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
EBF1Q9UH73 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC17.42■□□□□ 0.38
EBF1Q9UH73 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
EBF1Q9UH73 AC004461.1-201ENST00000412461 403 ntBASIC17.42■□□□□ 0.38
EBF1Q9UH73 ACTG1P4-201ENST00000425123 1122 ntBASIC17.42■□□□□ 0.38
EBF1Q9UH73 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC17.42■□□□□ 0.38
EBF1Q9UH73 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC17.42■□□□□ 0.38
EBF1Q9UH73 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC17.42■□□□□ 0.38
EBF1Q9UH73 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC17.42■□□□□ 0.38
EBF1Q9UH73 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC17.42■□□□□ 0.38
EBF1Q9UH73 AC068137.2-201ENST00000605408 478 ntBASIC17.42■□□□□ 0.38
EBF1Q9UH73 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC17.42■□□□□ 0.38
EBF1Q9UH73 MED16-214ENST00000617672 554 ntTSL 5 BASIC17.42■□□□□ 0.38
EBF1Q9UH73 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
EBF1Q9UH73 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
EBF1Q9UH73 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
EBF1Q9UH73 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC17.42■□□□□ 0.38
EBF1Q9UH73 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
EBF1Q9UH73 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
EBF1Q9UH73 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
EBF1Q9UH73 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
EBF1Q9UH73 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
EBF1Q9UH73 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
EBF1Q9UH73 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
EBF1Q9UH73 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
EBF1Q9UH73 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
EBF1Q9UH73 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
EBF1Q9UH73 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
EBF1Q9UH73 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
EBF1Q9UH73 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
EBF1Q9UH73 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.41■□□□□ 0.38
EBF1Q9UH73 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
EBF1Q9UH73 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
EBF1Q9UH73 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
EBF1Q9UH73 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC17.41■□□□□ 0.38
EBF1Q9UH73 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC17.41■□□□□ 0.38
EBF1Q9UH73 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC17.41■□□□□ 0.38
EBF1Q9UH73 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
EBF1Q9UH73 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
EBF1Q9UH73 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
EBF1Q9UH73 AL035633.1-201ENST00000406139 838 ntBASIC17.41■□□□□ 0.38
EBF1Q9UH73 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC17.41■□□□□ 0.38
EBF1Q9UH73 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC17.41■□□□□ 0.38
EBF1Q9UH73 WDR53-203ENST00000429115 683 ntTSL 2 BASIC17.41■□□□□ 0.38
EBF1Q9UH73 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC17.41■□□□□ 0.38
EBF1Q9UH73 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC17.41■□□□□ 0.38
EBF1Q9UH73 AC025678.2-201ENST00000562061 970 ntBASIC17.41■□□□□ 0.38
EBF1Q9UH73 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
EBF1Q9UH73 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
EBF1Q9UH73 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
EBF1Q9UH73 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
EBF1Q9UH73 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
EBF1Q9UH73 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
EBF1Q9UH73 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
EBF1Q9UH73 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
EBF1Q9UH73 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
EBF1Q9UH73 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
EBF1Q9UH73 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
EBF1Q9UH73 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
EBF1Q9UH73 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
EBF1Q9UH73 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
EBF1Q9UH73 STK4-201ENST00000372801 2038 ntTSL 2 BASIC17.4■□□□□ 0.38
EBF1Q9UH73 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC17.4■□□□□ 0.38
EBF1Q9UH73 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC17.4■□□□□ 0.38
EBF1Q9UH73 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
EBF1Q9UH73 AC012317.2-201ENST00000623305 2251 ntBASIC17.4■□□□□ 0.38
EBF1Q9UH73 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.4■□□□□ 0.38
EBF1Q9UH73 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
EBF1Q9UH73 GNAS-203ENST00000306120 1878 ntBASIC17.4■□□□□ 0.38
EBF1Q9UH73 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC17.4■□□□□ 0.38
EBF1Q9UH73 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
EBF1Q9UH73 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
EBF1Q9UH73 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
EBF1Q9UH73 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
EBF1Q9UH73 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC17.4■□□□□ 0.38
EBF1Q9UH73 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC17.4■□□□□ 0.38
EBF1Q9UH73 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC17.4■□□□□ 0.38
EBF1Q9UH73 FAM185BP-201ENST00000443595 716 ntBASIC17.4■□□□□ 0.38
EBF1Q9UH73 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC17.4■□□□□ 0.38
EBF1Q9UH73 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC17.4■□□□□ 0.38
EBF1Q9UH73 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
EBF1Q9UH73 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
EBF1Q9UH73 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
EBF1Q9UH73 RPL28-205ENST00000558131 444 ntTSL 5 BASIC17.4■□□□□ 0.38
EBF1Q9UH73 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
EBF1Q9UH73 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC17.4■□□□□ 0.38
EBF1Q9UH73 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms