Protein–RNA interactions for Protein: Q9UBP0

SPAST, Spastin, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPASTQ9UBP0 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SPASTQ9UBP0 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.06■□□□□ 0.32
SPASTQ9UBP0 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SPASTQ9UBP0 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SPASTQ9UBP0 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
SPASTQ9UBP0 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SPASTQ9UBP0 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
SPASTQ9UBP0 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SPASTQ9UBP0 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
SPASTQ9UBP0 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SPASTQ9UBP0 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SPASTQ9UBP0 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
SPASTQ9UBP0 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SPASTQ9UBP0 ATP6V0CP3-201ENST00000417255 467 ntBASIC17.06■□□□□ 0.32
SPASTQ9UBP0 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC17.06■□□□□ 0.32
SPASTQ9UBP0 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC17.06■□□□□ 0.32
SPASTQ9UBP0 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC17.06■□□□□ 0.32
SPASTQ9UBP0 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC17.06■□□□□ 0.32
SPASTQ9UBP0 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SPASTQ9UBP0 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC17.06■□□□□ 0.32
SPASTQ9UBP0 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC17.06■□□□□ 0.32
SPASTQ9UBP0 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC17.06■□□□□ 0.32
SPASTQ9UBP0 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
SPASTQ9UBP0 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SPASTQ9UBP0 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SPASTQ9UBP0 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.06■□□□□ 0.32
SPASTQ9UBP0 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC17.06■□□□□ 0.32
SPASTQ9UBP0 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SPASTQ9UBP0 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SPASTQ9UBP0 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
SPASTQ9UBP0 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SPASTQ9UBP0 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC17.06■□□□□ 0.32
SPASTQ9UBP0 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
SPASTQ9UBP0 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
SPASTQ9UBP0 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SPASTQ9UBP0 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SPASTQ9UBP0 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.05■□□□□ 0.32
SPASTQ9UBP0 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
SPASTQ9UBP0 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC17.05■□□□□ 0.32
SPASTQ9UBP0 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
SPASTQ9UBP0 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC17.05■□□□□ 0.32
SPASTQ9UBP0 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
SPASTQ9UBP0 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SPASTQ9UBP0 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SPASTQ9UBP0 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC17.05■□□□□ 0.32
SPASTQ9UBP0 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC17.05■□□□□ 0.32
SPASTQ9UBP0 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SPASTQ9UBP0 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SPASTQ9UBP0 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SPASTQ9UBP0 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SPASTQ9UBP0 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC17.05■□□□□ 0.32
SPASTQ9UBP0 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
SPASTQ9UBP0 LINC00982-205ENST00000420957 435 ntBASIC17.05■□□□□ 0.32
SPASTQ9UBP0 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC17.05■□□□□ 0.32
SPASTQ9UBP0 KRT18P2-201ENST00000447938 1258 ntBASIC17.05■□□□□ 0.32
SPASTQ9UBP0 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC17.05■□□□□ 0.32
SPASTQ9UBP0 CD63-210ENST00000550776 870 ntTSL 5 BASIC17.05■□□□□ 0.32
SPASTQ9UBP0 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC17.05■□□□□ 0.32
SPASTQ9UBP0 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SPASTQ9UBP0 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC17.05■□□□□ 0.32
SPASTQ9UBP0 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC17.05■□□□□ 0.32
SPASTQ9UBP0 AL353135.1-201ENST00000606729 504 ntBASIC17.05■□□□□ 0.32
SPASTQ9UBP0 GGTLC5P-201ENST00000617623 998 ntBASIC17.05■□□□□ 0.32
SPASTQ9UBP0 AC004790.2-201ENST00000623588 572 ntBASIC17.05■□□□□ 0.32
SPASTQ9UBP0 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SPASTQ9UBP0 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC17.05■□□□□ 0.32
SPASTQ9UBP0 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
SPASTQ9UBP0 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
SPASTQ9UBP0 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SPASTQ9UBP0 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC17.05■□□□□ 0.32
SPASTQ9UBP0 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SPASTQ9UBP0 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC17.05■□□□□ 0.32
SPASTQ9UBP0 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SPASTQ9UBP0 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17.05■□□□□ 0.32
SPASTQ9UBP0 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
SPASTQ9UBP0 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SPASTQ9UBP0 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
SPASTQ9UBP0 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
SPASTQ9UBP0 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SPASTQ9UBP0 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC17.04■□□□□ 0.32
SPASTQ9UBP0 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC17.04■□□□□ 0.32
SPASTQ9UBP0 AC002310.6-201ENST00000624451 1377 ntBASIC17.04■□□□□ 0.32
SPASTQ9UBP0 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC17.04■□□□□ 0.32
SPASTQ9UBP0 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
SPASTQ9UBP0 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
SPASTQ9UBP0 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
SPASTQ9UBP0 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
SPASTQ9UBP0 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SPASTQ9UBP0 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
SPASTQ9UBP0 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SPASTQ9UBP0 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
SPASTQ9UBP0 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC17.04■□□□□ 0.32
SPASTQ9UBP0 MRPL20P1-201ENST00000400819 433 ntBASIC17.04■□□□□ 0.32
SPASTQ9UBP0 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC17.04■□□□□ 0.32
SPASTQ9UBP0 COA5-202ENST00000409997 557 ntTSL 4 BASIC17.04■□□□□ 0.32
SPASTQ9UBP0 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC17.04■□□□□ 0.32
SPASTQ9UBP0 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC17.04■□□□□ 0.32
SPASTQ9UBP0 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC17.04■□□□□ 0.32
SPASTQ9UBP0 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC17.04■□□□□ 0.32
SPASTQ9UBP0 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms