Protein–RNA interactions for Protein: Q9P035

HACD3, Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3Q9P035 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC17.33■□□□□ 0.37
HACD3Q9P035 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
HACD3Q9P035 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
HACD3Q9P035 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
HACD3Q9P035 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
HACD3Q9P035 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
HACD3Q9P035 LINC00982-205ENST00000420957 435 ntBASIC17.33■□□□□ 0.36
HACD3Q9P035 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
HACD3Q9P035 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
HACD3Q9P035 EMBP1-201ENST00000458200 901 ntBASIC17.33■□□□□ 0.36
HACD3Q9P035 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
HACD3Q9P035 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HACD3Q9P035 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC17.33■□□□□ 0.36
HACD3Q9P035 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
HACD3Q9P035 MTDHP4-201ENST00000600287 670 ntBASIC17.33■□□□□ 0.36
HACD3Q9P035 AL121912.1-201ENST00000603683 238 ntBASIC17.33■□□□□ 0.36
HACD3Q9P035 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
HACD3Q9P035 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17.33■□□□□ 0.36
HACD3Q9P035 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
HACD3Q9P035 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
HACD3Q9P035 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
HACD3Q9P035 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HACD3Q9P035 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
HACD3Q9P035 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
HACD3Q9P035 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC17.33■□□□□ 0.36
HACD3Q9P035 LINC02012-201ENST00000608206 1725 ntBASIC17.33■□□□□ 0.36
HACD3Q9P035 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HACD3Q9P035 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC17.32■□□□□ 0.36
HACD3Q9P035 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC17.32■□□□□ 0.36
HACD3Q9P035 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
HACD3Q9P035 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HACD3Q9P035 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
HACD3Q9P035 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
HACD3Q9P035 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HACD3Q9P035 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC17.32■□□□□ 0.36
HACD3Q9P035 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC17.32■□□□□ 0.36
HACD3Q9P035 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
HACD3Q9P035 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC17.32■□□□□ 0.36
HACD3Q9P035 NKILA-202ENST00000614771 2598 ntBASIC17.32■□□□□ 0.36
HACD3Q9P035 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HACD3Q9P035 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HACD3Q9P035 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC17.32■□□□□ 0.36
HACD3Q9P035 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC17.32■□□□□ 0.36
HACD3Q9P035 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC17.32■□□□□ 0.36
HACD3Q9P035 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC17.32■□□□□ 0.36
HACD3Q9P035 AC139887.3-201ENST00000568585 713 ntBASIC17.32■□□□□ 0.36
HACD3Q9P035 RN7SL510P-201ENST00000581311 263 ntBASIC17.32■□□□□ 0.36
HACD3Q9P035 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
HACD3Q9P035 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
HACD3Q9P035 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC17.32■□□□□ 0.36
HACD3Q9P035 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HACD3Q9P035 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
HACD3Q9P035 AL118508.1-201ENST00000613502 2345 ntBASIC17.32■□□□□ 0.36
HACD3Q9P035 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HACD3Q9P035 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
HACD3Q9P035 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
HACD3Q9P035 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HACD3Q9P035 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HACD3Q9P035 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HACD3Q9P035 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
HACD3Q9P035 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
HACD3Q9P035 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC17.31■□□□□ 0.36
HACD3Q9P035 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HACD3Q9P035 RHBDF1P1-201ENST00000427504 1941 ntBASIC17.31■□□□□ 0.36
HACD3Q9P035 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
HACD3Q9P035 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HACD3Q9P035 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HACD3Q9P035 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC17.31■□□□□ 0.36
HACD3Q9P035 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HACD3Q9P035 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC17.31■□□□□ 0.36
HACD3Q9P035 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
HACD3Q9P035 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC17.31■□□□□ 0.36
HACD3Q9P035 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC17.31■□□□□ 0.36
HACD3Q9P035 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HACD3Q9P035 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HACD3Q9P035 RAB17-203ENST00000409576 466 ntTSL 3 BASIC17.31■□□□□ 0.36
HACD3Q9P035 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC17.31■□□□□ 0.36
HACD3Q9P035 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC17.31■□□□□ 0.36
HACD3Q9P035 AC073648.2-201ENST00000510116 352 ntBASIC17.31■□□□□ 0.36
HACD3Q9P035 PP7080-204ENST00000510714 601 ntTSL 3 BASIC17.31■□□□□ 0.36
HACD3Q9P035 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HACD3Q9P035 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC17.31■□□□□ 0.36
HACD3Q9P035 RNF151-202ENST00000569210 853 ntTSL 2 BASIC17.31■□□□□ 0.36
HACD3Q9P035 IRF5-214ENST00000613821 595 ntTSL 5 BASIC17.31■□□□□ 0.36
HACD3Q9P035 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HACD3Q9P035 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
HACD3Q9P035 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HACD3Q9P035 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HACD3Q9P035 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC17.31■□□□□ 0.36
HACD3Q9P035 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HACD3Q9P035 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HACD3Q9P035 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
HACD3Q9P035 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
HACD3Q9P035 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
HACD3Q9P035 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HACD3Q9P035 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
HACD3Q9P035 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
HACD3Q9P035 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC17.3■□□□□ 0.36
HACD3Q9P035 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
HACD3Q9P035 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms