Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.34■□□□□ 0.37
NCKIPSDQ9NZQ3 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
NCKIPSDQ9NZQ3 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC17.34■□□□□ 0.37
NCKIPSDQ9NZQ3 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC17.34■□□□□ 0.37
NCKIPSDQ9NZQ3 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
NCKIPSDQ9NZQ3 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
NCKIPSDQ9NZQ3 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC17.33■□□□□ 0.37
NCKIPSDQ9NZQ3 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
NCKIPSDQ9NZQ3 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC17.33■□□□□ 0.37
NCKIPSDQ9NZQ3 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
NCKIPSDQ9NZQ3 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
NCKIPSDQ9NZQ3 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
NCKIPSDQ9NZQ3 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
NCKIPSDQ9NZQ3 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
NCKIPSDQ9NZQ3 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
NCKIPSDQ9NZQ3 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17.33■□□□□ 0.36
NCKIPSDQ9NZQ3 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
NCKIPSDQ9NZQ3 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
NCKIPSDQ9NZQ3 LAGE3P1-201ENST00000425356 484 ntBASIC17.33■□□□□ 0.36
NCKIPSDQ9NZQ3 AC005104.2-201ENST00000427818 678 ntBASIC17.33■□□□□ 0.36
NCKIPSDQ9NZQ3 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC17.33■□□□□ 0.36
NCKIPSDQ9NZQ3 AC122714.2-201ENST00000502787 707 ntBASIC17.33■□□□□ 0.36
NCKIPSDQ9NZQ3 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC17.33■□□□□ 0.36
NCKIPSDQ9NZQ3 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
NCKIPSDQ9NZQ3 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC17.33■□□□□ 0.36
NCKIPSDQ9NZQ3 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC17.33■□□□□ 0.36
NCKIPSDQ9NZQ3 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC17.33■□□□□ 0.36
NCKIPSDQ9NZQ3 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC17.33■□□□□ 0.36
NCKIPSDQ9NZQ3 AP000867.4-201ENST00000641616 219 ntBASIC17.33■□□□□ 0.36
NCKIPSDQ9NZQ3 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC17.33■□□□□ 0.36
NCKIPSDQ9NZQ3 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
NCKIPSDQ9NZQ3 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17.33■□□□□ 0.36
NCKIPSDQ9NZQ3 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
NCKIPSDQ9NZQ3 LYSMD4-203ENST00000378904 2122 ntBASIC17.33■□□□□ 0.36
NCKIPSDQ9NZQ3 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
NCKIPSDQ9NZQ3 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC17.33■□□□□ 0.36
NCKIPSDQ9NZQ3 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC17.33■□□□□ 0.36
NCKIPSDQ9NZQ3 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
NCKIPSDQ9NZQ3 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
NCKIPSDQ9NZQ3 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NCKIPSDQ9NZQ3 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NCKIPSDQ9NZQ3 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
NCKIPSDQ9NZQ3 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC17.32■□□□□ 0.36
NCKIPSDQ9NZQ3 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NCKIPSDQ9NZQ3 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
NCKIPSDQ9NZQ3 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NCKIPSDQ9NZQ3 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC17.32■□□□□ 0.36
NCKIPSDQ9NZQ3 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
NCKIPSDQ9NZQ3 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
NCKIPSDQ9NZQ3 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
NCKIPSDQ9NZQ3 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NCKIPSDQ9NZQ3 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
NCKIPSDQ9NZQ3 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
NCKIPSDQ9NZQ3 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NCKIPSDQ9NZQ3 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
NCKIPSDQ9NZQ3 MIR940-201ENST00000401276 94 ntBASIC17.32■□□□□ 0.36
NCKIPSDQ9NZQ3 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC17.32■□□□□ 0.36
NCKIPSDQ9NZQ3 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
NCKIPSDQ9NZQ3 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC17.32■□□□□ 0.36
NCKIPSDQ9NZQ3 AC105339.3-201ENST00000560043 636 ntBASIC17.32■□□□□ 0.36
NCKIPSDQ9NZQ3 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC17.32■□□□□ 0.36
NCKIPSDQ9NZQ3 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
NCKIPSDQ9NZQ3 MTDHP4-201ENST00000600287 670 ntBASIC17.32■□□□□ 0.36
NCKIPSDQ9NZQ3 AC025062.2-201ENST00000605477 670 ntBASIC17.32■□□□□ 0.36
NCKIPSDQ9NZQ3 AC107918.4-202ENST00000641623 219 ntBASIC17.32■□□□□ 0.36
NCKIPSDQ9NZQ3 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
NCKIPSDQ9NZQ3 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NCKIPSDQ9NZQ3 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
NCKIPSDQ9NZQ3 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NCKIPSDQ9NZQ3 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
NCKIPSDQ9NZQ3 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NCKIPSDQ9NZQ3 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC17.31■□□□□ 0.36
NCKIPSDQ9NZQ3 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NCKIPSDQ9NZQ3 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
NCKIPSDQ9NZQ3 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NCKIPSDQ9NZQ3 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.31■□□□□ 0.36
NCKIPSDQ9NZQ3 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC17.31■□□□□ 0.36
NCKIPSDQ9NZQ3 AC104109.2-201ENST00000602919 1418 ntBASIC17.31■□□□□ 0.36
NCKIPSDQ9NZQ3 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
NCKIPSDQ9NZQ3 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC17.31■□□□□ 0.36
NCKIPSDQ9NZQ3 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NCKIPSDQ9NZQ3 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.31■□□□□ 0.36
NCKIPSDQ9NZQ3 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC17.31■□□□□ 0.36
NCKIPSDQ9NZQ3 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
NCKIPSDQ9NZQ3 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NCKIPSDQ9NZQ3 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NCKIPSDQ9NZQ3 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC17.31■□□□□ 0.36
NCKIPSDQ9NZQ3 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC17.31■□□□□ 0.36
NCKIPSDQ9NZQ3 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
NCKIPSDQ9NZQ3 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NCKIPSDQ9NZQ3 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NCKIPSDQ9NZQ3 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NCKIPSDQ9NZQ3 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
NCKIPSDQ9NZQ3 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
NCKIPSDQ9NZQ3 AC096633.1-201ENST00000422446 749 ntBASIC17.31■□□□□ 0.36
NCKIPSDQ9NZQ3 AC007967.3-201ENST00000434308 558 ntBASIC17.31■□□□□ 0.36
NCKIPSDQ9NZQ3 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
NCKIPSDQ9NZQ3 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC17.31■□□□□ 0.36
NCKIPSDQ9NZQ3 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC17.31■□□□□ 0.36
NCKIPSDQ9NZQ3 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms