Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC16.89■□□□□ 0.29
MKS1Q9NXB0 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
MKS1Q9NXB0 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
MKS1Q9NXB0 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
MKS1Q9NXB0 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
MKS1Q9NXB0 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC16.89■□□□□ 0.29
MKS1Q9NXB0 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
MKS1Q9NXB0 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC16.89■□□□□ 0.29
MKS1Q9NXB0 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC16.89■□□□□ 0.29
MKS1Q9NXB0 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
MKS1Q9NXB0 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
MKS1Q9NXB0 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
MKS1Q9NXB0 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC16.89■□□□□ 0.29
MKS1Q9NXB0 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
MKS1Q9NXB0 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
MKS1Q9NXB0 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
MKS1Q9NXB0 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC16.88■□□□□ 0.29
MKS1Q9NXB0 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
MKS1Q9NXB0 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
MKS1Q9NXB0 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
MKS1Q9NXB0 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
MKS1Q9NXB0 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
MKS1Q9NXB0 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
MKS1Q9NXB0 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
MKS1Q9NXB0 NKTR-203ENST00000442970 646 ntTSL 2 BASIC16.88■□□□□ 0.29
MKS1Q9NXB0 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
MKS1Q9NXB0 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC16.88■□□□□ 0.29
MKS1Q9NXB0 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC16.88■□□□□ 0.29
MKS1Q9NXB0 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC16.88■□□□□ 0.29
MKS1Q9NXB0 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC16.88■□□□□ 0.29
MKS1Q9NXB0 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
MKS1Q9NXB0 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC16.88■□□□□ 0.29
MKS1Q9NXB0 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
MKS1Q9NXB0 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
MKS1Q9NXB0 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
MKS1Q9NXB0 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
MKS1Q9NXB0 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
MKS1Q9NXB0 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
MKS1Q9NXB0 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
MKS1Q9NXB0 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
MKS1Q9NXB0 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
MKS1Q9NXB0 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
MKS1Q9NXB0 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
MKS1Q9NXB0 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
MKS1Q9NXB0 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
MKS1Q9NXB0 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
MKS1Q9NXB0 AC008894.3-201ENST00000624324 3103 ntBASIC16.87■□□□□ 0.29
MKS1Q9NXB0 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
MKS1Q9NXB0 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC16.87■□□□□ 0.29
MKS1Q9NXB0 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
MKS1Q9NXB0 PC-204ENST00000524491 1714 ntTSL 2 BASIC16.87■□□□□ 0.29
MKS1Q9NXB0 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC16.87■□□□□ 0.29
MKS1Q9NXB0 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC16.87■□□□□ 0.29
MKS1Q9NXB0 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
MKS1Q9NXB0 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC16.87■□□□□ 0.29
MKS1Q9NXB0 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
MKS1Q9NXB0 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
MKS1Q9NXB0 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
MKS1Q9NXB0 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
MKS1Q9NXB0 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
MKS1Q9NXB0 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
MKS1Q9NXB0 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
MKS1Q9NXB0 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC16.87■□□□□ 0.29
MKS1Q9NXB0 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
MKS1Q9NXB0 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
MKS1Q9NXB0 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
MKS1Q9NXB0 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC16.87■□□□□ 0.29
MKS1Q9NXB0 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC16.87■□□□□ 0.29
MKS1Q9NXB0 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC16.87■□□□□ 0.29
MKS1Q9NXB0 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
MKS1Q9NXB0 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
MKS1Q9NXB0 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
MKS1Q9NXB0 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
MKS1Q9NXB0 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC16.87■□□□□ 0.29
MKS1Q9NXB0 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC16.87■□□□□ 0.29
MKS1Q9NXB0 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
MKS1Q9NXB0 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
MKS1Q9NXB0 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
MKS1Q9NXB0 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC16.87■□□□□ 0.29
MKS1Q9NXB0 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
MKS1Q9NXB0 MST1L-201ENST00000442552 2185 ntBASIC16.87■□□□□ 0.29
MKS1Q9NXB0 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
MKS1Q9NXB0 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
MKS1Q9NXB0 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
MKS1Q9NXB0 FOS-208ENST00000555686 1496 ntTSL 2 BASIC16.86■□□□□ 0.29
MKS1Q9NXB0 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC16.86■□□□□ 0.29
MKS1Q9NXB0 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC16.86■□□□□ 0.29
MKS1Q9NXB0 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC16.86■□□□□ 0.29
MKS1Q9NXB0 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
MKS1Q9NXB0 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC16.86■□□□□ 0.29
MKS1Q9NXB0 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC16.86■□□□□ 0.29
MKS1Q9NXB0 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC16.86■□□□□ 0.29
MKS1Q9NXB0 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
MKS1Q9NXB0 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC16.86■□□□□ 0.29
MKS1Q9NXB0 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
MKS1Q9NXB0 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
MKS1Q9NXB0 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC16.86■□□□□ 0.29
MKS1Q9NXB0 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC16.86■□□□□ 0.29
MKS1Q9NXB0 AC092647.4-201ENST00000457211 535 ntBASIC16.86■□□□□ 0.29
MKS1Q9NXB0 DET1-205ENST00000558413 583 ntTSL 4 BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms