Protein–RNA interactions for Protein: Q9NRR5

UBQLN4, Ubiquilin-4, humanhuman

Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4Q9NRR5 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC15.74■□□□□ 0.11
UBQLN4Q9NRR5 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
UBQLN4Q9NRR5 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
UBQLN4Q9NRR5 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC15.74■□□□□ 0.11
UBQLN4Q9NRR5 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
UBQLN4Q9NRR5 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
UBQLN4Q9NRR5 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
UBQLN4Q9NRR5 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
UBQLN4Q9NRR5 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC15.73■□□□□ 0.11
UBQLN4Q9NRR5 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
UBQLN4Q9NRR5 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC15.73■□□□□ 0.11
UBQLN4Q9NRR5 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC15.73■□□□□ 0.11
UBQLN4Q9NRR5 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
UBQLN4Q9NRR5 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
UBQLN4Q9NRR5 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
UBQLN4Q9NRR5 AD000864.1-201ENST00000624076 2295 ntBASIC15.73■□□□□ 0.11
UBQLN4Q9NRR5 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC15.73■□□□□ 0.11
UBQLN4Q9NRR5 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
UBQLN4Q9NRR5 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
UBQLN4Q9NRR5 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
UBQLN4Q9NRR5 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
UBQLN4Q9NRR5 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC15.73■□□□□ 0.11
UBQLN4Q9NRR5 AC079781.3-201ENST00000449110 356 ntBASIC15.73■□□□□ 0.11
UBQLN4Q9NRR5 AC018712.1-201ENST00000455767 687 ntBASIC15.73■□□□□ 0.11
UBQLN4Q9NRR5 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
UBQLN4Q9NRR5 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC15.73■□□□□ 0.11
UBQLN4Q9NRR5 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC15.73■□□□□ 0.11
UBQLN4Q9NRR5 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC15.73■□□□□ 0.11
UBQLN4Q9NRR5 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC15.73■□□□□ 0.11
UBQLN4Q9NRR5 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC15.73■□□□□ 0.11
UBQLN4Q9NRR5 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC15.73■□□□□ 0.11
UBQLN4Q9NRR5 AL031008.1-201ENST00000619963 541 ntBASIC15.73■□□□□ 0.11
UBQLN4Q9NRR5 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC15.73■□□□□ 0.11
UBQLN4Q9NRR5 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
UBQLN4Q9NRR5 AC022211.2-201ENST00000585075 2527 ntBASIC15.73■□□□□ 0.11
UBQLN4Q9NRR5 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
UBQLN4Q9NRR5 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
UBQLN4Q9NRR5 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
UBQLN4Q9NRR5 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC15.73■□□□□ 0.11
UBQLN4Q9NRR5 AC092068.3-201ENST00000587894 2016 ntBASIC15.73■□□□□ 0.11
UBQLN4Q9NRR5 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
UBQLN4Q9NRR5 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
UBQLN4Q9NRR5 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
UBQLN4Q9NRR5 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC15.73■□□□□ 0.11
UBQLN4Q9NRR5 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
UBQLN4Q9NRR5 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
UBQLN4Q9NRR5 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
UBQLN4Q9NRR5 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC15.73■□□□□ 0.11
UBQLN4Q9NRR5 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
UBQLN4Q9NRR5 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
UBQLN4Q9NRR5 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
UBQLN4Q9NRR5 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
UBQLN4Q9NRR5 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
UBQLN4Q9NRR5 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
UBQLN4Q9NRR5 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
UBQLN4Q9NRR5 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
UBQLN4Q9NRR5 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
UBQLN4Q9NRR5 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC15.72■□□□□ 0.11
UBQLN4Q9NRR5 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
UBQLN4Q9NRR5 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
UBQLN4Q9NRR5 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC15.72■□□□□ 0.11
UBQLN4Q9NRR5 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
UBQLN4Q9NRR5 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
UBQLN4Q9NRR5 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
UBQLN4Q9NRR5 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
UBQLN4Q9NRR5 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC15.72■□□□□ 0.11
UBQLN4Q9NRR5 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC15.72■□□□□ 0.11
UBQLN4Q9NRR5 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC15.72■□□□□ 0.11
UBQLN4Q9NRR5 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC15.72■□□□□ 0.11
UBQLN4Q9NRR5 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
UBQLN4Q9NRR5 AL160237.2-201ENST00000556165 472 ntBASIC15.72■□□□□ 0.11
UBQLN4Q9NRR5 TERC-201ENST00000602385 541 ntBASIC15.72■□□□□ 0.11
UBQLN4Q9NRR5 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
UBQLN4Q9NRR5 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
UBQLN4Q9NRR5 AC243591.1-201ENST00000452967 1364 ntBASIC15.72■□□□□ 0.11
UBQLN4Q9NRR5 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
UBQLN4Q9NRR5 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
UBQLN4Q9NRR5 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
UBQLN4Q9NRR5 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
UBQLN4Q9NRR5 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
UBQLN4Q9NRR5 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
UBQLN4Q9NRR5 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
UBQLN4Q9NRR5 TUBB8P12-201ENST00000308911 1335 ntBASIC15.71■□□□□ 0.11
UBQLN4Q9NRR5 TUBB7P-202ENST00000428444 1305 ntBASIC15.71■□□□□ 0.11
UBQLN4Q9NRR5 TUBB8P7-204ENST00000567960 1332 ntBASIC15.71■□□□□ 0.11
UBQLN4Q9NRR5 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
UBQLN4Q9NRR5 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
UBQLN4Q9NRR5 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC15.71■□□□□ 0.11
UBQLN4Q9NRR5 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
UBQLN4Q9NRR5 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
UBQLN4Q9NRR5 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
UBQLN4Q9NRR5 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC15.71■□□□□ 0.11
UBQLN4Q9NRR5 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
UBQLN4Q9NRR5 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
UBQLN4Q9NRR5 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
UBQLN4Q9NRR5 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
UBQLN4Q9NRR5 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
UBQLN4Q9NRR5 INIP-202ENST00000374236 874 ntTSL 2 BASIC15.71■□□□□ 0.11
UBQLN4Q9NRR5 PTCHD3P3-201ENST00000403073 906 ntBASIC15.71■□□□□ 0.11
UBQLN4Q9NRR5 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC15.71■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms