Protein–RNA interactions for Protein: Q9H422

HIPK3, Homeodomain-interacting protein kinase 3, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3Q9H422 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HIPK3Q9H422 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC18.57■□□□□ 0.56
HIPK3Q9H422 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
HIPK3Q9H422 LTB4R2-202ENST00000528054 3092 ntBASIC18.57■□□□□ 0.56
HIPK3Q9H422 BCL2-203ENST00000589955 5011 ntBASIC18.57■□□□□ 0.56
HIPK3Q9H422 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
HIPK3Q9H422 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
HIPK3Q9H422 OR8S1-201ENST00000310194 1080 ntBASIC18.57■□□□□ 0.56
HIPK3Q9H422 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HIPK3Q9H422 MIR346-201ENST00000362234 95 ntBASIC18.57■□□□□ 0.56
HIPK3Q9H422 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
HIPK3Q9H422 PIN1P1-201ENST00000412108 996 ntBASIC18.57■□□□□ 0.56
HIPK3Q9H422 HCG4-201ENST00000418983 998 ntBASIC18.57■□□□□ 0.56
HIPK3Q9H422 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC18.57■□□□□ 0.56
HIPK3Q9H422 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC18.57■□□□□ 0.56
HIPK3Q9H422 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
HIPK3Q9H422 MEIS3P1-201ENST00000495167 958 ntBASIC18.57■□□□□ 0.56
HIPK3Q9H422 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
HIPK3Q9H422 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
HIPK3Q9H422 SPDYE22P-201ENST00000582158 798 ntBASIC18.57■□□□□ 0.56
HIPK3Q9H422 AC009118.2-201ENST00000613275 655 ntBASIC18.57■□□□□ 0.56
HIPK3Q9H422 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HIPK3Q9H422 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
HIPK3Q9H422 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HIPK3Q9H422 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HIPK3Q9H422 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HIPK3Q9H422 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC18.57■□□□□ 0.56
HIPK3Q9H422 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
HIPK3Q9H422 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
HIPK3Q9H422 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HIPK3Q9H422 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HIPK3Q9H422 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HIPK3Q9H422 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC18.56■□□□□ 0.56
HIPK3Q9H422 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC18.56■□□□□ 0.56
HIPK3Q9H422 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HIPK3Q9H422 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HIPK3Q9H422 AC020916.1-201ENST00000587762 1774 ntBASIC18.56■□□□□ 0.56
HIPK3Q9H422 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HIPK3Q9H422 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC18.56■□□□□ 0.56
HIPK3Q9H422 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
HIPK3Q9H422 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HIPK3Q9H422 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HIPK3Q9H422 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC18.56■□□□□ 0.56
HIPK3Q9H422 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC18.56■□□□□ 0.56
HIPK3Q9H422 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC18.56■□□□□ 0.56
HIPK3Q9H422 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC18.56■□□□□ 0.56
HIPK3Q9H422 MTRF1LP2-201ENST00000506027 1122 ntBASIC18.56■□□□□ 0.56
HIPK3Q9H422 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
HIPK3Q9H422 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
HIPK3Q9H422 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
HIPK3Q9H422 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC18.56■□□□□ 0.56
HIPK3Q9H422 AL031055.1-201ENST00000606362 631 ntBASIC18.56■□□□□ 0.56
HIPK3Q9H422 COQ4-205ENST00000609948 956 ntTSL 2 BASIC18.56■□□□□ 0.56
HIPK3Q9H422 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC18.56■□□□□ 0.56
HIPK3Q9H422 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HIPK3Q9H422 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
HIPK3Q9H422 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HIPK3Q9H422 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
HIPK3Q9H422 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
HIPK3Q9H422 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC18.56■□□□□ 0.56
HIPK3Q9H422 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HIPK3Q9H422 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HIPK3Q9H422 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
HIPK3Q9H422 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
HIPK3Q9H422 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
HIPK3Q9H422 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
HIPK3Q9H422 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HIPK3Q9H422 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC18.55■□□□□ 0.56
HIPK3Q9H422 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
HIPK3Q9H422 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC18.55■□□□□ 0.56
HIPK3Q9H422 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HIPK3Q9H422 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
HIPK3Q9H422 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
HIPK3Q9H422 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
HIPK3Q9H422 RNU1-129P-201ENST00000384064 167 ntBASIC18.55■□□□□ 0.56
HIPK3Q9H422 MRPS18AP1-201ENST00000414458 589 ntBASIC18.55■□□□□ 0.56
HIPK3Q9H422 NME2P1-201ENST00000426182 414 ntBASIC18.55■□□□□ 0.56
HIPK3Q9H422 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC18.55■□□□□ 0.56
HIPK3Q9H422 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
HIPK3Q9H422 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC18.55■□□□□ 0.56
HIPK3Q9H422 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC18.55■□□□□ 0.56
HIPK3Q9H422 AC027369.6-201ENST00000525520 931 ntBASIC18.55■□□□□ 0.56
HIPK3Q9H422 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC18.55■□□□□ 0.56
HIPK3Q9H422 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC18.55■□□□□ 0.56
HIPK3Q9H422 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC18.55■□□□□ 0.56
HIPK3Q9H422 AL596325.1-201ENST00000563991 1082 ntBASIC18.55■□□□□ 0.56
HIPK3Q9H422 COQ9-214ENST00000567933 882 ntTSL 3 BASIC18.55■□□□□ 0.56
HIPK3Q9H422 U1.21-201ENST00000580816 167 ntBASIC18.55■□□□□ 0.56
HIPK3Q9H422 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC18.55■□□□□ 0.56
HIPK3Q9H422 AC073592.8-201ENST00000624126 511 ntBASIC18.55■□□□□ 0.56
HIPK3Q9H422 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HIPK3Q9H422 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
HIPK3Q9H422 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HIPK3Q9H422 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC18.55■□□□□ 0.56
HIPK3Q9H422 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
HIPK3Q9H422 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
HIPK3Q9H422 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
HIPK3Q9H422 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HIPK3Q9H422 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HIPK3Q9H422 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 66.5 ms