Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC5.8□□□□□ -1.48
KRTAP4-3Q9BYR4 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC5.8□□□□□ -1.48
KRTAP4-3Q9BYR4 AC096734.2-201ENST00000562054 433 ntBASIC5.8□□□□□ -1.48
KRTAP4-3Q9BYR4 AP002472.1-201ENST00000577490 586 ntBASIC5.8□□□□□ -1.48
KRTAP4-3Q9BYR4 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
KRTAP4-3Q9BYR4 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC5.8□□□□□ -1.48
KRTAP4-3Q9BYR4 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC5.8□□□□□ -1.48
KRTAP4-3Q9BYR4 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC5.8□□□□□ -1.48
KRTAP4-3Q9BYR4 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC5.8□□□□□ -1.48
KRTAP4-3Q9BYR4 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC5.8□□□□□ -1.48
KRTAP4-3Q9BYR4 C20orf181-201ENST00000623918 480 ntBASIC5.8□□□□□ -1.48
KRTAP4-3Q9BYR4 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
KRTAP4-3Q9BYR4 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC5.8□□□□□ -1.48
KRTAP4-3Q9BYR4 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC5.8□□□□□ -1.48
KRTAP4-3Q9BYR4 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
KRTAP4-3Q9BYR4 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC5.8□□□□□ -1.48
KRTAP4-3Q9BYR4 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC5.8□□□□□ -1.48
KRTAP4-3Q9BYR4 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
KRTAP4-3Q9BYR4 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC5.8□□□□□ -1.48
KRTAP4-3Q9BYR4 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
KRTAP4-3Q9BYR4 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
KRTAP4-3Q9BYR4 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
KRTAP4-3Q9BYR4 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
KRTAP4-3Q9BYR4 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC5.8□□□□□ -1.48
KRTAP4-3Q9BYR4 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
KRTAP4-3Q9BYR4 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC5.8□□□□□ -1.48
KRTAP4-3Q9BYR4 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
KRTAP4-3Q9BYR4 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
KRTAP4-3Q9BYR4 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC5.8□□□□□ -1.48
KRTAP4-3Q9BYR4 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
KRTAP4-3Q9BYR4 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC5.8□□□□□ -1.48
KRTAP4-3Q9BYR4 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC5.8□□□□□ -1.48
KRTAP4-3Q9BYR4 AC108860.2-201ENST00000562760 2183 ntBASIC5.8□□□□□ -1.48
KRTAP4-3Q9BYR4 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
KRTAP4-3Q9BYR4 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC5.8□□□□□ -1.48
KRTAP4-3Q9BYR4 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
KRTAP4-3Q9BYR4 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
KRTAP4-3Q9BYR4 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
KRTAP4-3Q9BYR4 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
KRTAP4-3Q9BYR4 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC5.8□□□□□ -1.48
KRTAP4-3Q9BYR4 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
KRTAP4-3Q9BYR4 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
KRTAP4-3Q9BYR4 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC5.8□□□□□ -1.48
KRTAP4-3Q9BYR4 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
KRTAP4-3Q9BYR4 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
KRTAP4-3Q9BYR4 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC5.8□□□□□ -1.48
KRTAP4-3Q9BYR4 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
KRTAP4-3Q9BYR4 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC5.8□□□□□ -1.48
KRTAP4-3Q9BYR4 ELL2P1-201ENST00000413990 1906 ntBASIC5.8□□□□□ -1.48
KRTAP4-3Q9BYR4 AC026471.1-201ENST00000564629 3026 ntBASIC5.8□□□□□ -1.48
KRTAP4-3Q9BYR4 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
KRTAP4-3Q9BYR4 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
KRTAP4-3Q9BYR4 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC5.8□□□□□ -1.48
KRTAP4-3Q9BYR4 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
KRTAP4-3Q9BYR4 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
KRTAP4-3Q9BYR4 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC5.79□□□□□ -1.48
KRTAP4-3Q9BYR4 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
KRTAP4-3Q9BYR4 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC5.79□□□□□ -1.48
KRTAP4-3Q9BYR4 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
KRTAP4-3Q9BYR4 GATB-213ENST00000515812 1893 ntTSL 5 BASIC5.79□□□□□ -1.48
KRTAP4-3Q9BYR4 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC5.79□□□□□ -1.48
KRTAP4-3Q9BYR4 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
KRTAP4-3Q9BYR4 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC5.79□□□□□ -1.48
KRTAP4-3Q9BYR4 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
KRTAP4-3Q9BYR4 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
KRTAP4-3Q9BYR4 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC5.79□□□□□ -1.48
KRTAP4-3Q9BYR4 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
KRTAP4-3Q9BYR4 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC5.79□□□□□ -1.48
KRTAP4-3Q9BYR4 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC5.79□□□□□ -1.48
KRTAP4-3Q9BYR4 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC5.79□□□□□ -1.48
KRTAP4-3Q9BYR4 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC5.79□□□□□ -1.48
KRTAP4-3Q9BYR4 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
KRTAP4-3Q9BYR4 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
KRTAP4-3Q9BYR4 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
KRTAP4-3Q9BYR4 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
KRTAP4-3Q9BYR4 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
KRTAP4-3Q9BYR4 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC5.79□□□□□ -1.48
KRTAP4-3Q9BYR4 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC5.79□□□□□ -1.48
KRTAP4-3Q9BYR4 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
KRTAP4-3Q9BYR4 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC5.79□□□□□ -1.48
KRTAP4-3Q9BYR4 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC5.79□□□□□ -1.48
KRTAP4-3Q9BYR4 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
KRTAP4-3Q9BYR4 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC5.79□□□□□ -1.48
KRTAP4-3Q9BYR4 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
KRTAP4-3Q9BYR4 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
KRTAP4-3Q9BYR4 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
KRTAP4-3Q9BYR4 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC5.79□□□□□ -1.48
KRTAP4-3Q9BYR4 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
KRTAP4-3Q9BYR4 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
KRTAP4-3Q9BYR4 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
KRTAP4-3Q9BYR4 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
KRTAP4-3Q9BYR4 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
KRTAP4-3Q9BYR4 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
KRTAP4-3Q9BYR4 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
KRTAP4-3Q9BYR4 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
KRTAP4-3Q9BYR4 METTL26-205ENST00000397666 726 ntTSL 2 BASIC5.79□□□□□ -1.48
KRTAP4-3Q9BYR4 NABP1-203ENST00000409510 843 ntTSL 5 BASIC5.79□□□□□ -1.48
KRTAP4-3Q9BYR4 AC004461.1-201ENST00000412461 403 ntBASIC5.79□□□□□ -1.48
KRTAP4-3Q9BYR4 CNN2P11-201ENST00000429351 262 ntBASIC5.79□□□□□ -1.48
KRTAP4-3Q9BYR4 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms