Protein–RNA interactions for Protein: Q9BV87

CNPPD1, Protein CNPPD1, humanhuman

Predictions only

Length 410 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNPPD1Q9BV87 AL355877.3-201ENST00000622820 899 ntBASIC16.3■□□□□ 0.2
CNPPD1Q9BV87 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC16.3■□□□□ 0.2
CNPPD1Q9BV87 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CNPPD1Q9BV87 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CNPPD1Q9BV87 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CNPPD1Q9BV87 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
CNPPD1Q9BV87 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CNPPD1Q9BV87 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
CNPPD1Q9BV87 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CNPPD1Q9BV87 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CNPPD1Q9BV87 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
CNPPD1Q9BV87 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.3■□□□□ 0.2
CNPPD1Q9BV87 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC16.3■□□□□ 0.2
CNPPD1Q9BV87 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CNPPD1Q9BV87 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CNPPD1Q9BV87 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CNPPD1Q9BV87 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
CNPPD1Q9BV87 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC16.29■□□□□ 0.2
CNPPD1Q9BV87 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CNPPD1Q9BV87 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CNPPD1Q9BV87 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
CNPPD1Q9BV87 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CNPPD1Q9BV87 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CNPPD1Q9BV87 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CNPPD1Q9BV87 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
CNPPD1Q9BV87 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CNPPD1Q9BV87 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC16.29■□□□□ 0.2
CNPPD1Q9BV87 UBALD1-205ENST00000590891 2641 ntBASIC16.29■□□□□ 0.2
CNPPD1Q9BV87 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CNPPD1Q9BV87 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CNPPD1Q9BV87 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CNPPD1Q9BV87 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CNPPD1Q9BV87 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CNPPD1Q9BV87 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CNPPD1Q9BV87 TLE1-202ENST00000376484 666 ntTSL 3 BASIC16.29■□□□□ 0.2
CNPPD1Q9BV87 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CNPPD1Q9BV87 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
CNPPD1Q9BV87 AL020989.1-201ENST00000422979 469 ntBASIC16.29■□□□□ 0.2
CNPPD1Q9BV87 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CNPPD1Q9BV87 FAAHP1-202ENST00000446499 1238 ntBASIC16.29■□□□□ 0.2
CNPPD1Q9BV87 AC079781.3-201ENST00000449110 356 ntBASIC16.29■□□□□ 0.2
CNPPD1Q9BV87 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC16.29■□□□□ 0.2
CNPPD1Q9BV87 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC16.29■□□□□ 0.2
CNPPD1Q9BV87 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC16.29■□□□□ 0.2
CNPPD1Q9BV87 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC16.29■□□□□ 0.2
CNPPD1Q9BV87 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CNPPD1Q9BV87 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC16.29■□□□□ 0.2
CNPPD1Q9BV87 AL031008.1-201ENST00000619963 541 ntBASIC16.29■□□□□ 0.2
CNPPD1Q9BV87 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC16.29■□□□□ 0.2
CNPPD1Q9BV87 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CNPPD1Q9BV87 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CNPPD1Q9BV87 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CNPPD1Q9BV87 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CNPPD1Q9BV87 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CNPPD1Q9BV87 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CNPPD1Q9BV87 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC16.29■□□□□ 0.2
CNPPD1Q9BV87 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CNPPD1Q9BV87 AC009336.1-201ENST00000608941 1553 ntBASIC16.29■□□□□ 0.2
CNPPD1Q9BV87 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CNPPD1Q9BV87 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
CNPPD1Q9BV87 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CNPPD1Q9BV87 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CNPPD1Q9BV87 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC16.29■□□□□ 0.2
CNPPD1Q9BV87 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CNPPD1Q9BV87 AC046158.3-201ENST00000624947 2558 ntBASIC16.29■□□□□ 0.2
CNPPD1Q9BV87 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CNPPD1Q9BV87 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CNPPD1Q9BV87 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CNPPD1Q9BV87 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CNPPD1Q9BV87 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC16.28■□□□□ 0.2
CNPPD1Q9BV87 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CNPPD1Q9BV87 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CNPPD1Q9BV87 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
CNPPD1Q9BV87 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CNPPD1Q9BV87 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CNPPD1Q9BV87 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CNPPD1Q9BV87 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CNPPD1Q9BV87 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
CNPPD1Q9BV87 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
CNPPD1Q9BV87 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CNPPD1Q9BV87 AL356309.3-201ENST00000624132 1934 ntBASIC16.28■□□□□ 0.2
CNPPD1Q9BV87 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CNPPD1Q9BV87 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC16.28■□□□□ 0.2
CNPPD1Q9BV87 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CNPPD1Q9BV87 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC16.28■□□□□ 0.2
CNPPD1Q9BV87 SPDYE21P-201ENST00000413323 827 ntBASIC16.28■□□□□ 0.2
CNPPD1Q9BV87 FDX1P1-201ENST00000449115 551 ntBASIC16.28■□□□□ 0.2
CNPPD1Q9BV87 BX005266.1-201ENST00000473402 457 ntBASIC16.28■□□□□ 0.2
CNPPD1Q9BV87 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC16.28■□□□□ 0.2
CNPPD1Q9BV87 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC16.28■□□□□ 0.2
CNPPD1Q9BV87 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CNPPD1Q9BV87 AL138688.1-201ENST00000624851 1594 ntBASIC16.28■□□□□ 0.2
CNPPD1Q9BV87 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CNPPD1Q9BV87 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CNPPD1Q9BV87 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CNPPD1Q9BV87 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC16.28■□□□□ 0.2
CNPPD1Q9BV87 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC16.28■□□□□ 0.2
CNPPD1Q9BV87 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CNPPD1Q9BV87 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CNPPD1Q9BV87 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms