Protein–RNA interactions for Protein: Q9BV40

VAMP8, Vesicle-associated membrane protein 8, humanhuman

Predictions only

Length 100 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP8Q9BV40 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC12.5□□□□□ -0.41
VAMP8Q9BV40 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
VAMP8Q9BV40 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
VAMP8Q9BV40 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
VAMP8Q9BV40 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
VAMP8Q9BV40 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
VAMP8Q9BV40 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
VAMP8Q9BV40 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
VAMP8Q9BV40 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
VAMP8Q9BV40 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
VAMP8Q9BV40 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
VAMP8Q9BV40 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC12.5□□□□□ -0.41
VAMP8Q9BV40 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
VAMP8Q9BV40 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
VAMP8Q9BV40 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC12.5□□□□□ -0.41
VAMP8Q9BV40 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
VAMP8Q9BV40 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
VAMP8Q9BV40 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC12.5□□□□□ -0.41
VAMP8Q9BV40 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
VAMP8Q9BV40 AP006587.1-201ENST00000534129 1502 ntBASIC12.5□□□□□ -0.41
VAMP8Q9BV40 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
VAMP8Q9BV40 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC12.5□□□□□ -0.41
VAMP8Q9BV40 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
VAMP8Q9BV40 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC12.5□□□□□ -0.41
VAMP8Q9BV40 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
VAMP8Q9BV40 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC12.5□□□□□ -0.41
VAMP8Q9BV40 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
VAMP8Q9BV40 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC12.5□□□□□ -0.41
VAMP8Q9BV40 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC12.5□□□□□ -0.41
VAMP8Q9BV40 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
VAMP8Q9BV40 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
VAMP8Q9BV40 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
VAMP8Q9BV40 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
VAMP8Q9BV40 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
VAMP8Q9BV40 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
VAMP8Q9BV40 CICP20-201ENST00000443330 2801 ntBASIC12.5□□□□□ -0.41
VAMP8Q9BV40 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
VAMP8Q9BV40 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
VAMP8Q9BV40 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
VAMP8Q9BV40 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
VAMP8Q9BV40 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
VAMP8Q9BV40 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
VAMP8Q9BV40 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
VAMP8Q9BV40 FBN3-207ENST00000601739 9086 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
VAMP8Q9BV40 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
VAMP8Q9BV40 AC010491.1-201ENST00000563101 2797 ntBASIC12.49□□□□□ -0.41
VAMP8Q9BV40 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC12.49□□□□□ -0.41
VAMP8Q9BV40 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC12.49□□□□□ -0.41
VAMP8Q9BV40 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC12.49□□□□□ -0.41
VAMP8Q9BV40 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
VAMP8Q9BV40 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC12.49□□□□□ -0.41
VAMP8Q9BV40 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC12.49□□□□□ -0.41
VAMP8Q9BV40 AL603832.2-201ENST00000566195 2125 ntBASIC12.49□□□□□ -0.41
VAMP8Q9BV40 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
VAMP8Q9BV40 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC12.49□□□□□ -0.41
VAMP8Q9BV40 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
VAMP8Q9BV40 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
VAMP8Q9BV40 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
VAMP8Q9BV40 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
VAMP8Q9BV40 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
VAMP8Q9BV40 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
VAMP8Q9BV40 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
VAMP8Q9BV40 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
VAMP8Q9BV40 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
VAMP8Q9BV40 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC12.49□□□□□ -0.41
VAMP8Q9BV40 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC12.49□□□□□ -0.41
VAMP8Q9BV40 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC12.49□□□□□ -0.41
VAMP8Q9BV40 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC12.49□□□□□ -0.41
VAMP8Q9BV40 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
VAMP8Q9BV40 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC12.49□□□□□ -0.41
VAMP8Q9BV40 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
VAMP8Q9BV40 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC12.49□□□□□ -0.41
VAMP8Q9BV40 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC12.49□□□□□ -0.41
VAMP8Q9BV40 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC12.49□□□□□ -0.41
VAMP8Q9BV40 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
VAMP8Q9BV40 SF1-220ENST00000626028 704 ntTSL 2 BASIC12.49□□□□□ -0.41
VAMP8Q9BV40 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
VAMP8Q9BV40 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
VAMP8Q9BV40 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
VAMP8Q9BV40 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
VAMP8Q9BV40 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC12.49□□□□□ -0.41
VAMP8Q9BV40 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
VAMP8Q9BV40 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC12.49□□□□□ -0.41
VAMP8Q9BV40 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC12.49□□□□□ -0.41
VAMP8Q9BV40 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
VAMP8Q9BV40 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
VAMP8Q9BV40 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
VAMP8Q9BV40 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
VAMP8Q9BV40 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
VAMP8Q9BV40 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
VAMP8Q9BV40 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
VAMP8Q9BV40 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
VAMP8Q9BV40 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
VAMP8Q9BV40 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
VAMP8Q9BV40 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC12.49□□□□□ -0.41
VAMP8Q9BV40 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC12.49□□□□□ -0.41
VAMP8Q9BV40 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
VAMP8Q9BV40 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
VAMP8Q9BV40 ARHGAP23P1-201ENST00000562773 1937 ntBASIC12.49□□□□□ -0.41
VAMP8Q9BV40 ALOX12P2-203ENST00000570921 1945 ntBASIC12.49□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms