Protein–RNA interactions for Protein: Q99638

RAD9A, Cell cycle checkpoint control protein RAD9A, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD9AQ99638 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RAD9AQ99638 LYSMD4-203ENST00000378904 2122 ntBASIC18.11■□□□□ 0.49
RAD9AQ99638 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC18.11■□□□□ 0.49
RAD9AQ99638 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RAD9AQ99638 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RAD9AQ99638 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
RAD9AQ99638 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC18.11■□□□□ 0.49
RAD9AQ99638 HNRNPA3P1-201ENST00000401429 1139 ntBASIC18.11■□□□□ 0.49
RAD9AQ99638 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RAD9AQ99638 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC18.11■□□□□ 0.49
RAD9AQ99638 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
RAD9AQ99638 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC18.11■□□□□ 0.49
RAD9AQ99638 HNRNPA3P5-201ENST00000455201 833 ntBASIC18.11■□□□□ 0.49
RAD9AQ99638 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC18.11■□□□□ 0.49
RAD9AQ99638 RARRES2P9-201ENST00000565168 469 ntBASIC18.11■□□□□ 0.49
RAD9AQ99638 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
RAD9AQ99638 AC003101.2-201ENST00000612557 442 ntBASIC18.11■□□□□ 0.49
RAD9AQ99638 AL138828.2-201ENST00000615812 383 ntBASIC18.11■□□□□ 0.49
RAD9AQ99638 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RAD9AQ99638 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC18.11■□□□□ 0.49
RAD9AQ99638 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RAD9AQ99638 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RAD9AQ99638 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RAD9AQ99638 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
RAD9AQ99638 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RAD9AQ99638 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RAD9AQ99638 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
RAD9AQ99638 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RAD9AQ99638 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
RAD9AQ99638 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
RAD9AQ99638 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RAD9AQ99638 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
RAD9AQ99638 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.11■□□□□ 0.49
RAD9AQ99638 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RAD9AQ99638 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
RAD9AQ99638 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RAD9AQ99638 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
RAD9AQ99638 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
RAD9AQ99638 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC18.1■□□□□ 0.49
RAD9AQ99638 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RAD9AQ99638 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC18.1■□□□□ 0.49
RAD9AQ99638 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RAD9AQ99638 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.1■□□□□ 0.49
RAD9AQ99638 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
RAD9AQ99638 AL138781.2-201ENST00000617896 1843 ntBASIC18.1■□□□□ 0.49
RAD9AQ99638 SLC22A20-204ENST00000530038 1673 ntBASIC18.1■□□□□ 0.49
RAD9AQ99638 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC18.1■□□□□ 0.49
RAD9AQ99638 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC18.1■□□□□ 0.49
RAD9AQ99638 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
RAD9AQ99638 TOP3BP1-201ENST00000420768 1380 ntBASIC18.1■□□□□ 0.49
RAD9AQ99638 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
RAD9AQ99638 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
RAD9AQ99638 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC18.1■□□□□ 0.49
RAD9AQ99638 AC007967.4-201ENST00000614700 386 ntBASIC18.1■□□□□ 0.49
RAD9AQ99638 SPDYE12P-201ENST00000618416 771 ntBASIC18.1■□□□□ 0.49
RAD9AQ99638 SERF2-217ENST00000630046 862 ntTSL 5 BASIC18.1■□□□□ 0.49
RAD9AQ99638 AC026471.1-201ENST00000564629 3026 ntBASIC18.1■□□□□ 0.49
RAD9AQ99638 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RAD9AQ99638 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
RAD9AQ99638 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RAD9AQ99638 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
RAD9AQ99638 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RAD9AQ99638 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RAD9AQ99638 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RAD9AQ99638 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
RAD9AQ99638 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
RAD9AQ99638 AC138028.4-201ENST00000564984 1845 ntBASIC18.09■□□□□ 0.49
RAD9AQ99638 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RAD9AQ99638 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC18.09■□□□□ 0.49
RAD9AQ99638 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC18.09■□□□□ 0.49
RAD9AQ99638 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
RAD9AQ99638 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RAD9AQ99638 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC18.09■□□□□ 0.49
RAD9AQ99638 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RAD9AQ99638 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
RAD9AQ99638 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC18.09■□□□□ 0.49
RAD9AQ99638 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RAD9AQ99638 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RAD9AQ99638 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RAD9AQ99638 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RAD9AQ99638 ATP5G2P4-201ENST00000442175 420 ntBASIC18.09■□□□□ 0.49
RAD9AQ99638 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC18.09■□□□□ 0.49
RAD9AQ99638 REEP4-207ENST00000523293 913 ntTSL 3 BASIC18.09■□□□□ 0.49
RAD9AQ99638 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC18.09■□□□□ 0.49
RAD9AQ99638 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC18.09■□□□□ 0.49
RAD9AQ99638 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC18.09■□□□□ 0.49
RAD9AQ99638 MPI-209ENST00000564003 1195 ntTSL 2 BASIC18.09■□□□□ 0.49
RAD9AQ99638 SSH2-210ENST00000582084 560 ntTSL 3 BASIC18.09■□□□□ 0.49
RAD9AQ99638 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
RAD9AQ99638 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RAD9AQ99638 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RAD9AQ99638 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.09■□□□□ 0.49
RAD9AQ99638 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RAD9AQ99638 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
RAD9AQ99638 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC18.09■□□□□ 0.49
RAD9AQ99638 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
RAD9AQ99638 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC18.09■□□□□ 0.49
RAD9AQ99638 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RAD9AQ99638 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
RAD9AQ99638 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms