Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC14.34□□□□□ -0.11
CCL13Q99616 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC14.34□□□□□ -0.11
CCL13Q99616 AL356488.2-201ENST00000602755 427 ntBASIC14.34□□□□□ -0.11
CCL13Q99616 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC14.34□□□□□ -0.11
CCL13Q99616 AC116407.3-201ENST00000623905 1129 ntBASIC14.34□□□□□ -0.11
CCL13Q99616 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCL13Q99616 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCL13Q99616 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC14.34□□□□□ -0.11
CCL13Q99616 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCL13Q99616 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CCL13Q99616 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCL13Q99616 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCL13Q99616 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC14.34□□□□□ -0.11
CCL13Q99616 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCL13Q99616 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC14.34□□□□□ -0.11
CCL13Q99616 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CCL13Q99616 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCL13Q99616 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
CCL13Q99616 LTB4R2-202ENST00000528054 3092 ntBASIC14.33□□□□□ -0.11
CCL13Q99616 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC14.33□□□□□ -0.11
CCL13Q99616 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
CCL13Q99616 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CCL13Q99616 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCL13Q99616 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCL13Q99616 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
CCL13Q99616 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
CCL13Q99616 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCL13Q99616 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CCL13Q99616 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
CCL13Q99616 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC14.33□□□□□ -0.12
CCL13Q99616 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCL13Q99616 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCL13Q99616 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
CCL13Q99616 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC14.33□□□□□ -0.12
CCL13Q99616 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC14.33□□□□□ -0.12
CCL13Q99616 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC14.33□□□□□ -0.12
CCL13Q99616 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CCL13Q99616 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC14.33□□□□□ -0.12
CCL13Q99616 RPS29-206ENST00000557111 488 ntTSL 2 BASIC14.33□□□□□ -0.12
CCL13Q99616 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC14.33□□□□□ -0.12
CCL13Q99616 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC14.33□□□□□ -0.12
CCL13Q99616 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC14.33□□□□□ -0.12
CCL13Q99616 LITAF-211ENST00000572255 516 ntTSL 4 BASIC14.33□□□□□ -0.12
CCL13Q99616 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC14.33□□□□□ -0.12
CCL13Q99616 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
CCL13Q99616 AC005593.1-201ENST00000624894 515 ntBASIC14.33□□□□□ -0.12
CCL13Q99616 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CCL13Q99616 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCL13Q99616 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC14.33□□□□□ -0.12
CCL13Q99616 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCL13Q99616 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
CCL13Q99616 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCL13Q99616 AP001094.4-201ENST00000579008 2176 ntBASIC14.33□□□□□ -0.12
CCL13Q99616 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCL13Q99616 AC092053.1-201ENST00000605787 1936 ntBASIC14.33□□□□□ -0.12
CCL13Q99616 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCL13Q99616 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CCL13Q99616 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCL13Q99616 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC14.33□□□□□ -0.12
CCL13Q99616 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
CCL13Q99616 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CCL13Q99616 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
CCL13Q99616 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
CCL13Q99616 PI4KAP1-204ENST00000612579 1703 ntBASIC14.32□□□□□ -0.12
CCL13Q99616 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCL13Q99616 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CCL13Q99616 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCL13Q99616 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCL13Q99616 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCL13Q99616 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC14.32□□□□□ -0.12
CCL13Q99616 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCL13Q99616 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC14.32□□□□□ -0.12
CCL13Q99616 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
CCL13Q99616 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCL13Q99616 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCL13Q99616 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCL13Q99616 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCL13Q99616 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCL13Q99616 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCL13Q99616 CSF3-203ENST00000394148 622 ntTSL 3 BASIC14.32□□□□□ -0.12
CCL13Q99616 RPS15P9-201ENST00000494093 319 ntBASIC14.32□□□□□ -0.12
CCL13Q99616 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC14.32□□□□□ -0.12
CCL13Q99616 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC14.32□□□□□ -0.12
CCL13Q99616 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC14.32□□□□□ -0.12
CCL13Q99616 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC14.32□□□□□ -0.12
CCL13Q99616 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
CCL13Q99616 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC14.32□□□□□ -0.12
CCL13Q99616 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CCL13Q99616 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCL13Q99616 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC14.32□□□□□ -0.12
CCL13Q99616 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
CCL13Q99616 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC14.32□□□□□ -0.12
CCL13Q99616 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCL13Q99616 AC243591.1-201ENST00000452967 1364 ntBASIC14.32□□□□□ -0.12
CCL13Q99616 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCL13Q99616 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCL13Q99616 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCL13Q99616 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC14.32□□□□□ -0.12
CCL13Q99616 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCL13Q99616 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms