Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC27.84■■■□□ 2.05
IFT140Q96RY7 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC27.84■■■□□ 2.05
IFT140Q96RY7 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC27.84■■■□□ 2.05
IFT140Q96RY7 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC27.84■■■□□ 2.05
IFT140Q96RY7 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC27.84■■■□□ 2.05
IFT140Q96RY7 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC27.84■■■□□ 2.05
IFT140Q96RY7 RRP7BP-205ENST00000566851 833 ntBASIC27.84■■■□□ 2.05
IFT140Q96RY7 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC27.84■■■□□ 2.05
IFT140Q96RY7 AC004461.2-201ENST00000629517 803 ntBASIC27.84■■■□□ 2.05
IFT140Q96RY7 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC27.84■■■□□ 2.05
IFT140Q96RY7 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
IFT140Q96RY7 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC27.84■■■□□ 2.05
IFT140Q96RY7 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC27.84■■■□□ 2.05
IFT140Q96RY7 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
IFT140Q96RY7 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC27.84■■■□□ 2.05
IFT140Q96RY7 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC27.83■■■□□ 2.05
IFT140Q96RY7 AC099548.2-209ENST00000480264 625 ntBASIC27.83■■■□□ 2.05
IFT140Q96RY7 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC27.83■■■□□ 2.05
IFT140Q96RY7 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC27.83■■■□□ 2.05
IFT140Q96RY7 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC27.83■■■□□ 2.05
IFT140Q96RY7 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
IFT140Q96RY7 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC27.83■■■□□ 2.05
IFT140Q96RY7 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
IFT140Q96RY7 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC27.83■■■□□ 2.05
IFT140Q96RY7 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC27.83■■■□□ 2.05
IFT140Q96RY7 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC27.83■■■□□ 2.04
IFT140Q96RY7 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC27.83■■■□□ 2.04
IFT140Q96RY7 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC27.83■■■□□ 2.04
IFT140Q96RY7 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC27.83■■■□□ 2.04
IFT140Q96RY7 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC27.83■■■□□ 2.04
IFT140Q96RY7 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC27.83■■■□□ 2.04
IFT140Q96RY7 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC27.83■■■□□ 2.04
IFT140Q96RY7 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC27.83■■■□□ 2.04
IFT140Q96RY7 RPS24-214ENST00000613865 538 ntTSL 5 BASIC27.83■■■□□ 2.04
IFT140Q96RY7 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC27.82■■■□□ 2.04
IFT140Q96RY7 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC27.82■■■□□ 2.04
IFT140Q96RY7 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC27.82■■■□□ 2.04
IFT140Q96RY7 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC27.82■■■□□ 2.04
IFT140Q96RY7 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC27.82■■■□□ 2.04
IFT140Q96RY7 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC27.82■■■□□ 2.04
IFT140Q96RY7 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
IFT140Q96RY7 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC27.82■■■□□ 2.04
IFT140Q96RY7 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
IFT140Q96RY7 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC27.82■■■□□ 2.04
IFT140Q96RY7 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC27.82■■■□□ 2.04
IFT140Q96RY7 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC27.82■■■□□ 2.04
IFT140Q96RY7 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC27.82■■■□□ 2.04
IFT140Q96RY7 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC27.82■■■□□ 2.04
IFT140Q96RY7 AC098859.1-201ENST00000502915 1238 ntBASIC27.82■■■□□ 2.04
IFT140Q96RY7 QPRT-203ENST00000562473 579 ntTSL 3 BASIC27.82■■■□□ 2.04
IFT140Q96RY7 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC27.82■■■□□ 2.04
IFT140Q96RY7 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC27.82■■■□□ 2.04
IFT140Q96RY7 AC244093.1-201ENST00000610837 814 ntBASIC27.82■■■□□ 2.04
IFT140Q96RY7 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
IFT140Q96RY7 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
IFT140Q96RY7 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC27.82■■■□□ 2.04
IFT140Q96RY7 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC27.81■■■□□ 2.04
IFT140Q96RY7 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC27.81■■■□□ 2.04
IFT140Q96RY7 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC27.81■■■□□ 2.04
IFT140Q96RY7 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
IFT140Q96RY7 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC27.81■■■□□ 2.04
IFT140Q96RY7 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC27.81■■■□□ 2.04
IFT140Q96RY7 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC27.81■■■□□ 2.04
IFT140Q96RY7 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC27.81■■■□□ 2.04
IFT140Q96RY7 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
IFT140Q96RY7 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC27.81■■■□□ 2.04
IFT140Q96RY7 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC27.81■■■□□ 2.04
IFT140Q96RY7 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC27.81■■■□□ 2.04
IFT140Q96RY7 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
IFT140Q96RY7 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC27.81■■■□□ 2.04
IFT140Q96RY7 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
IFT140Q96RY7 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC27.8■■■□□ 2.04
IFT140Q96RY7 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC27.8■■■□□ 2.04
IFT140Q96RY7 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC27.8■■■□□ 2.04
IFT140Q96RY7 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC27.8■■■□□ 2.04
IFT140Q96RY7 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
IFT140Q96RY7 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC27.8■■■□□ 2.04
IFT140Q96RY7 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC27.8■■■□□ 2.04
IFT140Q96RY7 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC27.8■■■□□ 2.04
IFT140Q96RY7 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC27.8■■■□□ 2.04
IFT140Q96RY7 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
IFT140Q96RY7 STX1A-203ENST00000395155 783 ntTSL 2 BASIC27.8■■■□□ 2.04
IFT140Q96RY7 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC27.8■■■□□ 2.04
IFT140Q96RY7 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC27.8■■■□□ 2.04
IFT140Q96RY7 AC092337.1-201ENST00000568699 1129 ntBASIC27.8■■■□□ 2.04
IFT140Q96RY7 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC27.8■■■□□ 2.04
IFT140Q96RY7 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC27.8■■■□□ 2.04
IFT140Q96RY7 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC27.79■■■□□ 2.04
IFT140Q96RY7 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC27.79■■■□□ 2.04
IFT140Q96RY7 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC27.79■■■□□ 2.04
IFT140Q96RY7 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC27.79■■■□□ 2.04
IFT140Q96RY7 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC27.79■■■□□ 2.04
IFT140Q96RY7 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC27.79■■■□□ 2.04
IFT140Q96RY7 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC27.79■■■□□ 2.04
IFT140Q96RY7 TPI1-206ENST00000488464 791 ntTSL 5 BASIC27.79■■■□□ 2.04
IFT140Q96RY7 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC27.79■■■□□ 2.04
IFT140Q96RY7 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC27.79■■■□□ 2.04
IFT140Q96RY7 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC27.79■■■□□ 2.04
IFT140Q96RY7 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC27.79■■■□□ 2.04
IFT140Q96RY7 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC27.79■■■□□ 2.04
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms