Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC17.66■□□□□ 0.42
C9orf72Q96LT7 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
C9orf72Q96LT7 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
C9orf72Q96LT7 PPIH-202ENST00000372549 327 ntTSL 3 BASIC17.66■□□□□ 0.42
C9orf72Q96LT7 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
C9orf72Q96LT7 DRAXINP1-201ENST00000437611 948 ntBASIC17.66■□□□□ 0.42
C9orf72Q96LT7 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
C9orf72Q96LT7 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC17.66■□□□□ 0.42
C9orf72Q96LT7 MPI-205ENST00000562606 1052 ntTSL 3 BASIC17.66■□□□□ 0.42
C9orf72Q96LT7 AC090616.6-201ENST00000582640 721 ntBASIC17.66■□□□□ 0.42
C9orf72Q96LT7 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC17.66■□□□□ 0.42
C9orf72Q96LT7 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
C9orf72Q96LT7 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
C9orf72Q96LT7 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
C9orf72Q96LT7 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
C9orf72Q96LT7 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
C9orf72Q96LT7 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
C9orf72Q96LT7 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
C9orf72Q96LT7 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
C9orf72Q96LT7 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC17.66■□□□□ 0.42
C9orf72Q96LT7 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC17.66■□□□□ 0.42
C9orf72Q96LT7 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
C9orf72Q96LT7 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
C9orf72Q96LT7 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
C9orf72Q96LT7 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
C9orf72Q96LT7 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
C9orf72Q96LT7 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
C9orf72Q96LT7 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC17.66■□□□□ 0.42
C9orf72Q96LT7 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
C9orf72Q96LT7 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
C9orf72Q96LT7 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
C9orf72Q96LT7 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC17.65■□□□□ 0.42
C9orf72Q96LT7 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
C9orf72Q96LT7 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC17.65■□□□□ 0.42
C9orf72Q96LT7 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
C9orf72Q96LT7 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
C9orf72Q96LT7 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
C9orf72Q96LT7 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
C9orf72Q96LT7 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC17.65■□□□□ 0.42
C9orf72Q96LT7 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
C9orf72Q96LT7 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC17.65■□□□□ 0.42
C9orf72Q96LT7 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
C9orf72Q96LT7 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC17.65■□□□□ 0.42
C9orf72Q96LT7 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
C9orf72Q96LT7 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
C9orf72Q96LT7 TPSP2-201ENST00000561760 610 ntBASIC17.65■□□□□ 0.42
C9orf72Q96LT7 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC17.65■□□□□ 0.42
C9orf72Q96LT7 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
C9orf72Q96LT7 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
C9orf72Q96LT7 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC17.65■□□□□ 0.42
C9orf72Q96LT7 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
C9orf72Q96LT7 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC17.65■□□□□ 0.42
C9orf72Q96LT7 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
C9orf72Q96LT7 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
C9orf72Q96LT7 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
C9orf72Q96LT7 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
C9orf72Q96LT7 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC17.65■□□□□ 0.42
C9orf72Q96LT7 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
C9orf72Q96LT7 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
C9orf72Q96LT7 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
C9orf72Q96LT7 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC17.64■□□□□ 0.42
C9orf72Q96LT7 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
C9orf72Q96LT7 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
C9orf72Q96LT7 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
C9orf72Q96LT7 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.42
C9orf72Q96LT7 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
C9orf72Q96LT7 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
C9orf72Q96LT7 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
C9orf72Q96LT7 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.64■□□□□ 0.41
C9orf72Q96LT7 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC17.64■□□□□ 0.41
C9orf72Q96LT7 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
C9orf72Q96LT7 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
C9orf72Q96LT7 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
C9orf72Q96LT7 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
C9orf72Q96LT7 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
C9orf72Q96LT7 MYCLP1-201ENST00000372451 1075 ntBASIC17.64■□□□□ 0.41
C9orf72Q96LT7 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC17.64■□□□□ 0.41
C9orf72Q96LT7 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC17.64■□□□□ 0.41
C9orf72Q96LT7 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC17.64■□□□□ 0.41
C9orf72Q96LT7 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC17.64■□□□□ 0.41
C9orf72Q96LT7 SKP2-204ENST00000508514 821 ntTSL 3 BASIC17.64■□□□□ 0.41
C9orf72Q96LT7 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC17.64■□□□□ 0.41
C9orf72Q96LT7 IGHV3-52-201ENST00000519770 353 ntBASIC17.64■□□□□ 0.41
C9orf72Q96LT7 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC17.64■□□□□ 0.41
C9orf72Q96LT7 AL691432.3-201ENST00000621860 400 ntBASIC17.64■□□□□ 0.41
C9orf72Q96LT7 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
C9orf72Q96LT7 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
C9orf72Q96LT7 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC17.64■□□□□ 0.41
C9orf72Q96LT7 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
C9orf72Q96LT7 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
C9orf72Q96LT7 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
C9orf72Q96LT7 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC17.64■□□□□ 0.41
C9orf72Q96LT7 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC17.64■□□□□ 0.41
C9orf72Q96LT7 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
C9orf72Q96LT7 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC17.64■□□□□ 0.41
C9orf72Q96LT7 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
C9orf72Q96LT7 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC17.64■□□□□ 0.41
C9orf72Q96LT7 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC17.64■□□□□ 0.41
C9orf72Q96LT7 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC17.64■□□□□ 0.41
C9orf72Q96LT7 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms