Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 EML3-216ENST00000529309 2909 ntTSL 2 BASIC19.99■□□□□ 0.79
TRIM47Q96LD4 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TRIM47Q96LD4 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TRIM47Q96LD4 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRIM47Q96LD4 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRIM47Q96LD4 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRIM47Q96LD4 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC19.99■□□□□ 0.79
TRIM47Q96LD4 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRIM47Q96LD4 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC19.99■□□□□ 0.79
TRIM47Q96LD4 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC19.99■□□□□ 0.79
TRIM47Q96LD4 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRIM47Q96LD4 KLK8-202ENST00000320838 456 ntTSL 5 BASIC19.99■□□□□ 0.79
TRIM47Q96LD4 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TRIM47Q96LD4 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TRIM47Q96LD4 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC19.99■□□□□ 0.79
TRIM47Q96LD4 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC19.99■□□□□ 0.79
TRIM47Q96LD4 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC19.99■□□□□ 0.79
TRIM47Q96LD4 RBM7-207ENST00000544582 692 ntTSL 3 BASIC19.99■□□□□ 0.79
TRIM47Q96LD4 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC19.99■□□□□ 0.79
TRIM47Q96LD4 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TRIM47Q96LD4 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRIM47Q96LD4 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRIM47Q96LD4 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC19.99■□□□□ 0.79
TRIM47Q96LD4 AL035252.4-201ENST00000624174 288 ntBASIC19.99■□□□□ 0.79
TRIM47Q96LD4 Z92544.3-201ENST00000624747 417 ntBASIC19.99■□□□□ 0.79
TRIM47Q96LD4 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TRIM47Q96LD4 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC19.99■□□□□ 0.79
TRIM47Q96LD4 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRIM47Q96LD4 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
TRIM47Q96LD4 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC19.99■□□□□ 0.79
TRIM47Q96LD4 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC19.99■□□□□ 0.79
TRIM47Q96LD4 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
TRIM47Q96LD4 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRIM47Q96LD4 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
TRIM47Q96LD4 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TRIM47Q96LD4 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TRIM47Q96LD4 AC006116.8-202ENST00000587620 1550 ntBASIC19.99■□□□□ 0.79
TRIM47Q96LD4 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRIM47Q96LD4 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRIM47Q96LD4 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRIM47Q96LD4 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
TRIM47Q96LD4 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRIM47Q96LD4 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
TRIM47Q96LD4 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC19.99■□□□□ 0.79
TRIM47Q96LD4 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
TRIM47Q96LD4 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TRIM47Q96LD4 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRIM47Q96LD4 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRIM47Q96LD4 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC19.98■□□□□ 0.79
TRIM47Q96LD4 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRIM47Q96LD4 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC19.98■□□□□ 0.79
TRIM47Q96LD4 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
TRIM47Q96LD4 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TRIM47Q96LD4 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC19.98■□□□□ 0.79
TRIM47Q96LD4 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TRIM47Q96LD4 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRIM47Q96LD4 AC097637.2-201ENST00000624096 1997 ntBASIC19.98■□□□□ 0.79
TRIM47Q96LD4 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRIM47Q96LD4 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRIM47Q96LD4 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRIM47Q96LD4 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TRIM47Q96LD4 AC015922.1-201ENST00000421102 1152 ntBASIC19.98■□□□□ 0.79
TRIM47Q96LD4 AC005034.1-201ENST00000426657 489 ntBASIC19.98■□□□□ 0.79
TRIM47Q96LD4 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRIM47Q96LD4 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC19.98■□□□□ 0.79
TRIM47Q96LD4 SLBP-205ENST00000488267 987 ntTSL 2 BASIC19.98■□□□□ 0.79
TRIM47Q96LD4 RNA5SP421-201ENST00000516864 134 ntBASIC19.98■□□□□ 0.79
TRIM47Q96LD4 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
TRIM47Q96LD4 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC19.98■□□□□ 0.79
TRIM47Q96LD4 AL353135.1-201ENST00000606729 504 ntBASIC19.98■□□□□ 0.79
TRIM47Q96LD4 AJ011932.1-201ENST00000621707 465 ntBASIC19.98■□□□□ 0.79
TRIM47Q96LD4 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC19.98■□□□□ 0.79
TRIM47Q96LD4 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRIM47Q96LD4 AC063926.2-201ENST00000623766 1308 ntBASIC19.98■□□□□ 0.79
TRIM47Q96LD4 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TRIM47Q96LD4 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TRIM47Q96LD4 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRIM47Q96LD4 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRIM47Q96LD4 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TRIM47Q96LD4 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRIM47Q96LD4 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
TRIM47Q96LD4 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC19.97■□□□□ 0.79
TRIM47Q96LD4 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
TRIM47Q96LD4 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC19.97■□□□□ 0.79
TRIM47Q96LD4 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRIM47Q96LD4 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRIM47Q96LD4 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRIM47Q96LD4 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
TRIM47Q96LD4 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRIM47Q96LD4 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TRIM47Q96LD4 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRIM47Q96LD4 COPE-202ENST00000349893 948 ntTSL 2 BASIC19.97■□□□□ 0.79
TRIM47Q96LD4 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC19.97■□□□□ 0.79
TRIM47Q96LD4 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC19.97■□□□□ 0.79
TRIM47Q96LD4 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC19.97■□□□□ 0.79
TRIM47Q96LD4 DUX4L27-201ENST00000554796 1261 ntBASIC19.97■□□□□ 0.79
TRIM47Q96LD4 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC19.97■□□□□ 0.79
TRIM47Q96LD4 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TRIM47Q96LD4 MED16-214ENST00000617672 554 ntTSL 5 BASIC19.97■□□□□ 0.79
TRIM47Q96LD4 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 67.4 ms