Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CALR3Q96L12 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC18.13■□□□□ 0.49
CALR3Q96L12 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CALR3Q96L12 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CALR3Q96L12 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
CALR3Q96L12 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CALR3Q96L12 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CALR3Q96L12 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CALR3Q96L12 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CALR3Q96L12 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CALR3Q96L12 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
CALR3Q96L12 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC18.12■□□□□ 0.49
CALR3Q96L12 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
CALR3Q96L12 SIGLEC30P-201ENST00000455569 941 ntBASIC18.12■□□□□ 0.49
CALR3Q96L12 DUX4L26-201ENST00000489078 1255 ntBASIC18.12■□□□□ 0.49
CALR3Q96L12 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC18.12■□□□□ 0.49
CALR3Q96L12 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC18.12■□□□□ 0.49
CALR3Q96L12 NDUFV2-AS1-203ENST00000608008 779 ntBASIC18.12■□□□□ 0.49
CALR3Q96L12 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC18.12■□□□□ 0.49
CALR3Q96L12 AL121956.5-201ENST00000625261 221 ntBASIC18.12■□□□□ 0.49
CALR3Q96L12 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CALR3Q96L12 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC18.12■□□□□ 0.49
CALR3Q96L12 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC18.12■□□□□ 0.49
CALR3Q96L12 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CALR3Q96L12 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CALR3Q96L12 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC18.12■□□□□ 0.49
CALR3Q96L12 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC18.12■□□□□ 0.49
CALR3Q96L12 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
CALR3Q96L12 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC18.12■□□□□ 0.49
CALR3Q96L12 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CALR3Q96L12 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
CALR3Q96L12 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC18.12■□□□□ 0.49
CALR3Q96L12 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CALR3Q96L12 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC18.12■□□□□ 0.49
CALR3Q96L12 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
CALR3Q96L12 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CALR3Q96L12 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CALR3Q96L12 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CALR3Q96L12 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CALR3Q96L12 BANP-204ENST00000393208 2283 ntTSL 2 BASIC18.11■□□□□ 0.49
CALR3Q96L12 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CALR3Q96L12 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CALR3Q96L12 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
CALR3Q96L12 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
CALR3Q96L12 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC18.11■□□□□ 0.49
CALR3Q96L12 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC18.11■□□□□ 0.49
CALR3Q96L12 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC18.11■□□□□ 0.49
CALR3Q96L12 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
CALR3Q96L12 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC18.11■□□□□ 0.49
CALR3Q96L12 AL021920.2-201ENST00000624828 1351 ntBASIC18.11■□□□□ 0.49
CALR3Q96L12 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC18.11■□□□□ 0.49
CALR3Q96L12 PMPCAP1-201ENST00000508114 1576 ntBASIC18.11■□□□□ 0.49
CALR3Q96L12 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC18.11■□□□□ 0.49
CALR3Q96L12 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CALR3Q96L12 GCK-209ENST00000616242 2260 ntTSL 5 BASIC18.11■□□□□ 0.49
CALR3Q96L12 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CALR3Q96L12 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC18.11■□□□□ 0.49
CALR3Q96L12 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CALR3Q96L12 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
CALR3Q96L12 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
CALR3Q96L12 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CALR3Q96L12 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC18.1■□□□□ 0.49
CALR3Q96L12 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC18.1■□□□□ 0.49
CALR3Q96L12 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC18.1■□□□□ 0.49
CALR3Q96L12 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC18.1■□□□□ 0.49
CALR3Q96L12 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CALR3Q96L12 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CALR3Q96L12 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CALR3Q96L12 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC18.1■□□□□ 0.49
CALR3Q96L12 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
CALR3Q96L12 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
CALR3Q96L12 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC18.1■□□□□ 0.49
CALR3Q96L12 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC18.1■□□□□ 0.49
CALR3Q96L12 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CALR3Q96L12 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC18.1■□□□□ 0.49
CALR3Q96L12 TP73-AS1-210ENST00000637775 1455 ntBASIC18.1■□□□□ 0.49
CALR3Q96L12 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC18.1■□□□□ 0.49
CALR3Q96L12 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CALR3Q96L12 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CALR3Q96L12 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CALR3Q96L12 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
CALR3Q96L12 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CALR3Q96L12 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
CALR3Q96L12 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC18.1■□□□□ 0.49
CALR3Q96L12 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC18.1■□□□□ 0.49
CALR3Q96L12 HLA-J-202ENST00000469281 1241 ntBASIC18.1■□□□□ 0.49
CALR3Q96L12 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC18.1■□□□□ 0.49
CALR3Q96L12 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC18.1■□□□□ 0.49
CALR3Q96L12 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC18.1■□□□□ 0.49
CALR3Q96L12 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC18.1■□□□□ 0.49
CALR3Q96L12 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
CALR3Q96L12 Z69720.1-201ENST00000601483 472 ntBASIC18.1■□□□□ 0.49
CALR3Q96L12 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
CALR3Q96L12 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC18.1■□□□□ 0.49
CALR3Q96L12 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CALR3Q96L12 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CALR3Q96L12 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
CALR3Q96L12 AC092171.3-201ENST00000610122 2651 ntBASIC18.1■□□□□ 0.49
CALR3Q96L12 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CALR3Q96L12 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms