Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC18.09■□□□□ 0.49
TRIM11Q96F44 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
TRIM11Q96F44 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
TRIM11Q96F44 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TRIM11Q96F44 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRIM11Q96F44 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TRIM11Q96F44 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC18.09■□□□□ 0.49
TRIM11Q96F44 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TRIM11Q96F44 FLJ38576-201ENST00000623820 2459 ntBASIC18.09■□□□□ 0.49
TRIM11Q96F44 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
TRIM11Q96F44 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TRIM11Q96F44 NCF1C-201ENST00000438382 1427 ntBASIC18.09■□□□□ 0.49
TRIM11Q96F44 AC124067.4-201ENST00000519691 2379 ntBASIC18.09■□□□□ 0.49
TRIM11Q96F44 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
TRIM11Q96F44 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRIM11Q96F44 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
TRIM11Q96F44 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRIM11Q96F44 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC18.09■□□□□ 0.49
TRIM11Q96F44 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRIM11Q96F44 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRIM11Q96F44 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
TRIM11Q96F44 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
TRIM11Q96F44 AP002414.1-201ENST00000391405 1147 ntBASIC18.09■□□□□ 0.49
TRIM11Q96F44 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC18.09■□□□□ 0.49
TRIM11Q96F44 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC18.09■□□□□ 0.49
TRIM11Q96F44 CYB561-217ENST00000582997 877 ntTSL 5 BASIC18.09■□□□□ 0.49
TRIM11Q96F44 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC18.09■□□□□ 0.49
TRIM11Q96F44 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC18.09■□□□□ 0.49
TRIM11Q96F44 AL022326.1-202ENST00000641533 845 ntBASIC18.09■□□□□ 0.49
TRIM11Q96F44 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRIM11Q96F44 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRIM11Q96F44 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRIM11Q96F44 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC18.09■□□□□ 0.49
TRIM11Q96F44 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRIM11Q96F44 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRIM11Q96F44 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRIM11Q96F44 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRIM11Q96F44 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
TRIM11Q96F44 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC18.08■□□□□ 0.49
TRIM11Q96F44 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC18.08■□□□□ 0.49
TRIM11Q96F44 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
TRIM11Q96F44 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
TRIM11Q96F44 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
TRIM11Q96F44 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC18.08■□□□□ 0.49
TRIM11Q96F44 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
TRIM11Q96F44 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
TRIM11Q96F44 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
TRIM11Q96F44 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
TRIM11Q96F44 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.49
TRIM11Q96F44 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
TRIM11Q96F44 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC18.08■□□□□ 0.49
TRIM11Q96F44 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
TRIM11Q96F44 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
TRIM11Q96F44 UPK3BP1-201ENST00000428678 509 ntBASIC18.08■□□□□ 0.48
TRIM11Q96F44 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC18.08■□□□□ 0.48
TRIM11Q96F44 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC18.08■□□□□ 0.48
TRIM11Q96F44 FOSL1P1-201ENST00000511041 816 ntBASIC18.08■□□□□ 0.48
TRIM11Q96F44 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC18.08■□□□□ 0.48
TRIM11Q96F44 MIR3652-201ENST00000579335 131 ntBASIC18.08■□□□□ 0.48
TRIM11Q96F44 AL353135.1-201ENST00000606729 504 ntBASIC18.08■□□□□ 0.48
TRIM11Q96F44 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
TRIM11Q96F44 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
TRIM11Q96F44 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TRIM11Q96F44 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TRIM11Q96F44 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
TRIM11Q96F44 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
TRIM11Q96F44 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
TRIM11Q96F44 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
TRIM11Q96F44 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
TRIM11Q96F44 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TRIM11Q96F44 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
TRIM11Q96F44 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
TRIM11Q96F44 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
TRIM11Q96F44 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC18.08■□□□□ 0.48
TRIM11Q96F44 AL356309.3-201ENST00000624132 1934 ntBASIC18.08■□□□□ 0.48
TRIM11Q96F44 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TRIM11Q96F44 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
TRIM11Q96F44 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
TRIM11Q96F44 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRIM11Q96F44 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TRIM11Q96F44 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC18.07■□□□□ 0.48
TRIM11Q96F44 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC18.07■□□□□ 0.48
TRIM11Q96F44 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
TRIM11Q96F44 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC18.07■□□□□ 0.48
TRIM11Q96F44 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRIM11Q96F44 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
TRIM11Q96F44 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC18.07■□□□□ 0.48
TRIM11Q96F44 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC18.07■□□□□ 0.48
TRIM11Q96F44 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRIM11Q96F44 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TRIM11Q96F44 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TRIM11Q96F44 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC18.07■□□□□ 0.48
TRIM11Q96F44 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TRIM11Q96F44 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TRIM11Q96F44 AL121772.3-201ENST00000610840 674 ntBASIC18.07■□□□□ 0.48
TRIM11Q96F44 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC18.07■□□□□ 0.48
TRIM11Q96F44 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC18.07■□□□□ 0.48
TRIM11Q96F44 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRIM11Q96F44 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC18.07■□□□□ 0.48
TRIM11Q96F44 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms