Protein–RNA interactions for Protein: Q96DZ5

CLIP3, CAP-Gly domain-containing linker protein 3, humanhuman

Predictions only

Length 547 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3Q96DZ5 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLIP3Q96DZ5 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC16.57■□□□□ 0.24
CLIP3Q96DZ5 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CLIP3Q96DZ5 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
CLIP3Q96DZ5 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
CLIP3Q96DZ5 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLIP3Q96DZ5 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLIP3Q96DZ5 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC16.57■□□□□ 0.24
CLIP3Q96DZ5 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC16.56■□□□□ 0.24
CLIP3Q96DZ5 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CLIP3Q96DZ5 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
CLIP3Q96DZ5 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLIP3Q96DZ5 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC16.56■□□□□ 0.24
CLIP3Q96DZ5 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC16.56■□□□□ 0.24
CLIP3Q96DZ5 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
CLIP3Q96DZ5 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
CLIP3Q96DZ5 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CLIP3Q96DZ5 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
CLIP3Q96DZ5 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
CLIP3Q96DZ5 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLIP3Q96DZ5 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CLIP3Q96DZ5 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLIP3Q96DZ5 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLIP3Q96DZ5 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLIP3Q96DZ5 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC16.56■□□□□ 0.24
CLIP3Q96DZ5 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.56■□□□□ 0.24
CLIP3Q96DZ5 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLIP3Q96DZ5 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC16.56■□□□□ 0.24
CLIP3Q96DZ5 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLIP3Q96DZ5 KRT18P27-201ENST00000427733 1299 ntBASIC16.56■□□□□ 0.24
CLIP3Q96DZ5 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC16.56■□□□□ 0.24
CLIP3Q96DZ5 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC16.56■□□□□ 0.24
CLIP3Q96DZ5 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
CLIP3Q96DZ5 HS6ST1P1-201ENST00000481504 1234 ntBASIC16.56■□□□□ 0.24
CLIP3Q96DZ5 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
CLIP3Q96DZ5 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC16.56■□□□□ 0.24
CLIP3Q96DZ5 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLIP3Q96DZ5 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC16.56■□□□□ 0.24
CLIP3Q96DZ5 AC006538.3-201ENST00000612495 578 ntBASIC16.56■□□□□ 0.24
CLIP3Q96DZ5 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLIP3Q96DZ5 CROCCP2-202ENST00000412962 2773 ntBASIC16.56■□□□□ 0.24
CLIP3Q96DZ5 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CLIP3Q96DZ5 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CLIP3Q96DZ5 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
CLIP3Q96DZ5 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC16.56■□□□□ 0.24
CLIP3Q96DZ5 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
CLIP3Q96DZ5 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLIP3Q96DZ5 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLIP3Q96DZ5 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC16.56■□□□□ 0.24
CLIP3Q96DZ5 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC16.55■□□□□ 0.24
CLIP3Q96DZ5 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLIP3Q96DZ5 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC16.55■□□□□ 0.24
CLIP3Q96DZ5 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLIP3Q96DZ5 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLIP3Q96DZ5 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLIP3Q96DZ5 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
CLIP3Q96DZ5 STK24-203ENST00000397517 4578 ntTSL 2 BASIC16.55■□□□□ 0.24
CLIP3Q96DZ5 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CLIP3Q96DZ5 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLIP3Q96DZ5 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC16.55■□□□□ 0.24
CLIP3Q96DZ5 AC073621.1-201ENST00000392730 636 ntBASIC16.55■□□□□ 0.24
CLIP3Q96DZ5 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
CLIP3Q96DZ5 LBH-204ENST00000406087 559 ntTSL 4 BASIC16.55■□□□□ 0.24
CLIP3Q96DZ5 AC007967.2-201ENST00000432613 625 ntBASIC16.55■□□□□ 0.24
CLIP3Q96DZ5 KRT18P3-201ENST00000451602 1288 ntBASIC16.55■□□□□ 0.24
CLIP3Q96DZ5 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC16.55■□□□□ 0.24
CLIP3Q96DZ5 RNA5SP416-201ENST00000516838 111 ntBASIC16.55■□□□□ 0.24
CLIP3Q96DZ5 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC16.55■□□□□ 0.24
CLIP3Q96DZ5 ETFA-208ENST00000559602 792 ntTSL 3 BASIC16.55■□□□□ 0.24
CLIP3Q96DZ5 AC004706.3-202ENST00000621574 984 ntBASIC16.55■□□□□ 0.24
CLIP3Q96DZ5 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLIP3Q96DZ5 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC16.55■□□□□ 0.24
CLIP3Q96DZ5 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLIP3Q96DZ5 HLA-DQB1-201ENST00000374943 1656 ntBASIC16.55■□□□□ 0.24
CLIP3Q96DZ5 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLIP3Q96DZ5 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CLIP3Q96DZ5 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
CLIP3Q96DZ5 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
CLIP3Q96DZ5 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLIP3Q96DZ5 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLIP3Q96DZ5 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLIP3Q96DZ5 AC009336.1-201ENST00000608941 1553 ntBASIC16.55■□□□□ 0.24
CLIP3Q96DZ5 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLIP3Q96DZ5 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CLIP3Q96DZ5 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
CLIP3Q96DZ5 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CLIP3Q96DZ5 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLIP3Q96DZ5 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CLIP3Q96DZ5 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
CLIP3Q96DZ5 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC16.54■□□□□ 0.24
CLIP3Q96DZ5 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CLIP3Q96DZ5 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC16.54■□□□□ 0.24
CLIP3Q96DZ5 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CLIP3Q96DZ5 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
CLIP3Q96DZ5 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CLIP3Q96DZ5 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CLIP3Q96DZ5 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CLIP3Q96DZ5 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CLIP3Q96DZ5 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CLIP3Q96DZ5 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms