Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRIM43Q96BQ3 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TRIM43Q96BQ3 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRIM43Q96BQ3 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC18.37■□□□□ 0.53
TRIM43Q96BQ3 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRIM43Q96BQ3 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRIM43Q96BQ3 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TRIM43Q96BQ3 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRIM43Q96BQ3 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
TRIM43Q96BQ3 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TRIM43Q96BQ3 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TRIM43Q96BQ3 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC18.36■□□□□ 0.53
TRIM43Q96BQ3 TOP3BP1-201ENST00000420768 1380 ntBASIC18.36■□□□□ 0.53
TRIM43Q96BQ3 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC18.36■□□□□ 0.53
TRIM43Q96BQ3 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
TRIM43Q96BQ3 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
TRIM43Q96BQ3 AL035456.1-201ENST00000456064 1369 ntBASIC18.36■□□□□ 0.53
TRIM43Q96BQ3 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
TRIM43Q96BQ3 KRT17P8-201ENST00000540749 863 ntBASIC18.36■□□□□ 0.53
TRIM43Q96BQ3 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
TRIM43Q96BQ3 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC18.36■□□□□ 0.53
TRIM43Q96BQ3 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC18.36■□□□□ 0.53
TRIM43Q96BQ3 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC18.36■□□□□ 0.53
TRIM43Q96BQ3 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC18.36■□□□□ 0.53
TRIM43Q96BQ3 CHCHD2P3-201ENST00000603038 451 ntBASIC18.36■□□□□ 0.53
TRIM43Q96BQ3 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.36■□□□□ 0.53
TRIM43Q96BQ3 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.36■□□□□ 0.53
TRIM43Q96BQ3 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.36■□□□□ 0.53
TRIM43Q96BQ3 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
TRIM43Q96BQ3 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRIM43Q96BQ3 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC18.35■□□□□ 0.53
TRIM43Q96BQ3 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC18.35■□□□□ 0.53
TRIM43Q96BQ3 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TRIM43Q96BQ3 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC18.35■□□□□ 0.53
TRIM43Q96BQ3 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRIM43Q96BQ3 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.35■□□□□ 0.53
TRIM43Q96BQ3 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
TRIM43Q96BQ3 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.35■□□□□ 0.53
TRIM43Q96BQ3 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRIM43Q96BQ3 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
TRIM43Q96BQ3 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRIM43Q96BQ3 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRIM43Q96BQ3 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRIM43Q96BQ3 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRIM43Q96BQ3 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
TRIM43Q96BQ3 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRIM43Q96BQ3 PP14571-201ENST00000404327 934 ntTSL 2 BASIC18.35■□□□□ 0.53
TRIM43Q96BQ3 DFFBP1-201ENST00000433250 979 ntBASIC18.35■□□□□ 0.53
TRIM43Q96BQ3 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRIM43Q96BQ3 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC18.35■□□□□ 0.53
TRIM43Q96BQ3 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TRIM43Q96BQ3 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRIM43Q96BQ3 AC135586.1-201ENST00000539323 574 ntBASIC18.35■□□□□ 0.53
TRIM43Q96BQ3 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
TRIM43Q96BQ3 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC18.35■□□□□ 0.53
TRIM43Q96BQ3 AL589739.1-201ENST00000607720 493 ntBASIC18.35■□□□□ 0.53
TRIM43Q96BQ3 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
TRIM43Q96BQ3 CETN4P-206ENST00000642099 2168 ntBASIC18.35■□□□□ 0.53
TRIM43Q96BQ3 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TRIM43Q96BQ3 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC18.35■□□□□ 0.53
TRIM43Q96BQ3 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC18.35■□□□□ 0.53
TRIM43Q96BQ3 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRIM43Q96BQ3 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC18.35■□□□□ 0.53
TRIM43Q96BQ3 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC18.34■□□□□ 0.53
TRIM43Q96BQ3 STX3-203ENST00000529177 1571 ntTSL 2 BASIC18.34■□□□□ 0.53
TRIM43Q96BQ3 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRIM43Q96BQ3 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TRIM43Q96BQ3 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRIM43Q96BQ3 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC18.34■□□□□ 0.53
TRIM43Q96BQ3 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC18.34■□□□□ 0.53
TRIM43Q96BQ3 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRIM43Q96BQ3 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TRIM43Q96BQ3 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRIM43Q96BQ3 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC18.34■□□□□ 0.53
TRIM43Q96BQ3 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TRIM43Q96BQ3 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
TRIM43Q96BQ3 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRIM43Q96BQ3 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TRIM43Q96BQ3 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC18.34■□□□□ 0.53
TRIM43Q96BQ3 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TRIM43Q96BQ3 MTND6P24-201ENST00000440466 518 ntBASIC18.34■□□□□ 0.53
TRIM43Q96BQ3 AC022210.1-201ENST00000449856 793 ntBASIC18.34■□□□□ 0.53
TRIM43Q96BQ3 NOP2-211ENST00000540228 668 ntTSL 2 BASIC18.34■□□□□ 0.53
TRIM43Q96BQ3 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC18.34■□□□□ 0.53
TRIM43Q96BQ3 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC18.34■□□□□ 0.53
TRIM43Q96BQ3 WASH4P-201ENST00000564273 1246 ntBASIC18.34■□□□□ 0.53
TRIM43Q96BQ3 AC106886.1-201ENST00000568660 600 ntBASIC18.34■□□□□ 0.53
TRIM43Q96BQ3 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC18.34■□□□□ 0.53
TRIM43Q96BQ3 AC008494.3-201ENST00000606615 944 ntBASIC18.34■□□□□ 0.53
TRIM43Q96BQ3 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC18.34■□□□□ 0.53
TRIM43Q96BQ3 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
TRIM43Q96BQ3 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC18.34■□□□□ 0.53
TRIM43Q96BQ3 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC18.34■□□□□ 0.53
TRIM43Q96BQ3 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRIM43Q96BQ3 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
TRIM43Q96BQ3 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC18.34■□□□□ 0.53
TRIM43Q96BQ3 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
TRIM43Q96BQ3 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TRIM43Q96BQ3 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRIM43Q96BQ3 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms