Protein–RNA interactions for Protein: Q96BP2

CHCHD1, Coiled-coil-helix-coiled-coil-helix domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD1Q96BP2 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CHCHD1Q96BP2 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
CHCHD1Q96BP2 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
CHCHD1Q96BP2 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
CHCHD1Q96BP2 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
CHCHD1Q96BP2 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
CHCHD1Q96BP2 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CHCHD1Q96BP2 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CHCHD1Q96BP2 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CHCHD1Q96BP2 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CHCHD1Q96BP2 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CHCHD1Q96BP2 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC12.47□□□□□ -0.41
CHCHD1Q96BP2 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CHCHD1Q96BP2 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
CHCHD1Q96BP2 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CHCHD1Q96BP2 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CHCHD1Q96BP2 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CHCHD1Q96BP2 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC12.47□□□□□ -0.41
CHCHD1Q96BP2 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CHCHD1Q96BP2 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CHCHD1Q96BP2 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CHCHD1Q96BP2 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CHCHD1Q96BP2 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
CHCHD1Q96BP2 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CHCHD1Q96BP2 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CHCHD1Q96BP2 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CHCHD1Q96BP2 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC12.47□□□□□ -0.41
CHCHD1Q96BP2 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
CHCHD1Q96BP2 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CHCHD1Q96BP2 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC12.47□□□□□ -0.41
CHCHD1Q96BP2 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC12.47□□□□□ -0.41
CHCHD1Q96BP2 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CHCHD1Q96BP2 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CHCHD1Q96BP2 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CHCHD1Q96BP2 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC12.47□□□□□ -0.41
CHCHD1Q96BP2 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC12.47□□□□□ -0.41
CHCHD1Q96BP2 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC12.47□□□□□ -0.41
CHCHD1Q96BP2 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC12.47□□□□□ -0.41
CHCHD1Q96BP2 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC12.47□□□□□ -0.41
CHCHD1Q96BP2 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC12.47□□□□□ -0.41
CHCHD1Q96BP2 UNC93B4-201ENST00000505679 747 ntBASIC12.47□□□□□ -0.41
CHCHD1Q96BP2 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC12.47□□□□□ -0.41
CHCHD1Q96BP2 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC12.47□□□□□ -0.41
CHCHD1Q96BP2 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CHCHD1Q96BP2 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
CHCHD1Q96BP2 SOX15-203ENST00000570788 1093 ntBASIC12.47□□□□□ -0.41
CHCHD1Q96BP2 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC12.47□□□□□ -0.41
CHCHD1Q96BP2 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC12.47□□□□□ -0.41
CHCHD1Q96BP2 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
CHCHD1Q96BP2 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CHCHD1Q96BP2 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CHCHD1Q96BP2 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CHCHD1Q96BP2 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CHCHD1Q96BP2 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
CHCHD1Q96BP2 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CHCHD1Q96BP2 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC12.47□□□□□ -0.41
CHCHD1Q96BP2 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CHCHD1Q96BP2 STX3-203ENST00000529177 1571 ntTSL 2 BASIC12.47□□□□□ -0.41
CHCHD1Q96BP2 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC12.47□□□□□ -0.41
CHCHD1Q96BP2 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CHCHD1Q96BP2 OR2I1P-210ENST00000642037 4691 ntBASIC12.47□□□□□ -0.41
CHCHD1Q96BP2 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC12.47□□□□□ -0.41
CHCHD1Q96BP2 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CHCHD1Q96BP2 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC12.47□□□□□ -0.41
CHCHD1Q96BP2 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CHCHD1Q96BP2 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
CHCHD1Q96BP2 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC12.47□□□□□ -0.41
CHCHD1Q96BP2 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
CHCHD1Q96BP2 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
CHCHD1Q96BP2 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
CHCHD1Q96BP2 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CHCHD1Q96BP2 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CHCHD1Q96BP2 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
CHCHD1Q96BP2 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC12.46□□□□□ -0.41
CHCHD1Q96BP2 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC12.46□□□□□ -0.41
CHCHD1Q96BP2 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC12.46□□□□□ -0.41
CHCHD1Q96BP2 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.41
CHCHD1Q96BP2 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CHCHD1Q96BP2 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CHCHD1Q96BP2 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
CHCHD1Q96BP2 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CHCHD1Q96BP2 AC138035.3-201ENST00000622706 2791 ntBASIC12.46□□□□□ -0.41
CHCHD1Q96BP2 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CHCHD1Q96BP2 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CHCHD1Q96BP2 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC12.46□□□□□ -0.41
CHCHD1Q96BP2 METTL26-203ENST00000397664 604 ntTSL 2 BASIC12.46□□□□□ -0.41
CHCHD1Q96BP2 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CHCHD1Q96BP2 FAM207BP-201ENST00000447172 505 ntBASIC12.46□□□□□ -0.41
CHCHD1Q96BP2 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC12.46□□□□□ -0.41
CHCHD1Q96BP2 AC091874.3-201ENST00000512672 1195 ntBASIC12.46□□□□□ -0.41
CHCHD1Q96BP2 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
CHCHD1Q96BP2 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC12.46□□□□□ -0.41
CHCHD1Q96BP2 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC12.46□□□□□ -0.41
CHCHD1Q96BP2 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
CHCHD1Q96BP2 AC011298.2-201ENST00000617989 482 ntBASIC12.46□□□□□ -0.41
CHCHD1Q96BP2 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC12.46□□□□□ -0.41
CHCHD1Q96BP2 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CHCHD1Q96BP2 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
CHCHD1Q96BP2 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
CHCHD1Q96BP2 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms