Protein–RNA interactions for Protein: Q92834

RPGR, X-linked retinitis pigmentosa GTPase regulator, humanhuman

Known RBP Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRQ92834 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RPGRQ92834 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC20.93■□□□□ 0.94
RPGRQ92834 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
RPGRQ92834 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
RPGRQ92834 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
RPGRQ92834 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC20.93■□□□□ 0.94
RPGRQ92834 GSAP-205ENST00000430584 600 ntTSL 5 BASIC20.93■□□□□ 0.94
RPGRQ92834 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC20.93■□□□□ 0.94
RPGRQ92834 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC20.93■□□□□ 0.94
RPGRQ92834 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC20.93■□□□□ 0.94
RPGRQ92834 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
RPGRQ92834 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
RPGRQ92834 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC20.93■□□□□ 0.94
RPGRQ92834 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC20.93■□□□□ 0.94
RPGRQ92834 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RPGRQ92834 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RPGRQ92834 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC20.93■□□□□ 0.94
RPGRQ92834 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC20.93■□□□□ 0.94
RPGRQ92834 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
RPGRQ92834 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC20.93■□□□□ 0.94
RPGRQ92834 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC20.93■□□□□ 0.94
RPGRQ92834 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RPGRQ92834 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC20.93■□□□□ 0.94
RPGRQ92834 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RPGRQ92834 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC20.92■□□□□ 0.94
RPGRQ92834 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RPGRQ92834 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RPGRQ92834 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC20.92■□□□□ 0.94
RPGRQ92834 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
RPGRQ92834 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
RPGRQ92834 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RPGRQ92834 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC20.92■□□□□ 0.94
RPGRQ92834 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
RPGRQ92834 CD81-202ENST00000381036 880 ntTSL 3 BASIC20.92■□□□□ 0.94
RPGRQ92834 PUDP-206ENST00000540122 825 ntTSL 2 BASIC20.92■□□□□ 0.94
RPGRQ92834 MIR3909-201ENST00000579518 119 ntBASIC20.92■□□□□ 0.94
RPGRQ92834 AP001350.2-201ENST00000625104 1094 ntBASIC20.92■□□□□ 0.94
RPGRQ92834 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC20.92■□□□□ 0.94
RPGRQ92834 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC20.92■□□□□ 0.94
RPGRQ92834 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC20.92■□□□□ 0.94
RPGRQ92834 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RPGRQ92834 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RPGRQ92834 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC20.92■□□□□ 0.94
RPGRQ92834 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RPGRQ92834 AC016027.1-202ENST00000607927 1699 ntBASIC20.92■□□□□ 0.94
RPGRQ92834 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RPGRQ92834 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RPGRQ92834 BICD1-207ENST00000551848 1962 ntBASIC20.92■□□□□ 0.94
RPGRQ92834 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC20.92■□□□□ 0.94
RPGRQ92834 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RPGRQ92834 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RPGRQ92834 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RPGRQ92834 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC20.92■□□□□ 0.94
RPGRQ92834 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC20.92■□□□□ 0.94
RPGRQ92834 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RPGRQ92834 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
RPGRQ92834 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RPGRQ92834 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RPGRQ92834 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RPGRQ92834 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC20.91■□□□□ 0.94
RPGRQ92834 MIR346-201ENST00000362234 95 ntBASIC20.91■□□□□ 0.94
RPGRQ92834 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC20.91■□□□□ 0.94
RPGRQ92834 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC20.91■□□□□ 0.94
RPGRQ92834 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RPGRQ92834 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC20.91■□□□□ 0.94
RPGRQ92834 AC133963.1-201ENST00000504166 1679 ntBASIC20.91■□□□□ 0.94
RPGRQ92834 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
RPGRQ92834 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC20.91■□□□□ 0.94
RPGRQ92834 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
RPGRQ92834 MIR4453-201ENST00000584019 89 ntBASIC20.91■□□□□ 0.94
RPGRQ92834 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RPGRQ92834 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RPGRQ92834 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC20.91■□□□□ 0.94
RPGRQ92834 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
RPGRQ92834 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RPGRQ92834 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
RPGRQ92834 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
RPGRQ92834 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RPGRQ92834 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC20.9■□□□□ 0.94
RPGRQ92834 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC20.9■□□□□ 0.94
RPGRQ92834 EGFEM1P-202ENST00000431685 1563 ntBASIC20.9■□□□□ 0.94
RPGRQ92834 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RPGRQ92834 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
RPGRQ92834 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
RPGRQ92834 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
RPGRQ92834 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC20.9■□□□□ 0.94
RPGRQ92834 PXK-206ENST00000463280 2825 ntTSL 2 BASIC20.9■□□□□ 0.94
RPGRQ92834 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC20.9■□□□□ 0.94
RPGRQ92834 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
RPGRQ92834 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RPGRQ92834 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RPGRQ92834 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC20.9■□□□□ 0.94
RPGRQ92834 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RPGRQ92834 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RPGRQ92834 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RPGRQ92834 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RPGRQ92834 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
RPGRQ92834 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
RPGRQ92834 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RPGRQ92834 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms