Protein–RNA interactions for Protein: Q8WZA2

RAPGEF4, Rap guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4Q8WZA2 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
RAPGEF4Q8WZA2 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
RAPGEF4Q8WZA2 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC22.27■■□□□ 1.16
RAPGEF4Q8WZA2 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
RAPGEF4Q8WZA2 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC22.27■■□□□ 1.16
RAPGEF4Q8WZA2 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC22.27■■□□□ 1.16
RAPGEF4Q8WZA2 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
RAPGEF4Q8WZA2 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC22.27■■□□□ 1.16
RAPGEF4Q8WZA2 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC22.27■■□□□ 1.16
RAPGEF4Q8WZA2 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
RAPGEF4Q8WZA2 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
RAPGEF4Q8WZA2 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
RAPGEF4Q8WZA2 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
RAPGEF4Q8WZA2 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC22.27■■□□□ 1.15
RAPGEF4Q8WZA2 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC22.27■■□□□ 1.15
RAPGEF4Q8WZA2 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
RAPGEF4Q8WZA2 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
RAPGEF4Q8WZA2 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
RAPGEF4Q8WZA2 GNAS-203ENST00000306120 1878 ntBASIC22.26■■□□□ 1.15
RAPGEF4Q8WZA2 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC22.26■■□□□ 1.15
RAPGEF4Q8WZA2 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
RAPGEF4Q8WZA2 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
RAPGEF4Q8WZA2 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC22.26■■□□□ 1.15
RAPGEF4Q8WZA2 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
RAPGEF4Q8WZA2 MIR346-201ENST00000362234 95 ntBASIC22.26■■□□□ 1.15
RAPGEF4Q8WZA2 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
RAPGEF4Q8WZA2 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
RAPGEF4Q8WZA2 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC22.26■■□□□ 1.15
RAPGEF4Q8WZA2 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC22.26■■□□□ 1.15
RAPGEF4Q8WZA2 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC22.26■■□□□ 1.15
RAPGEF4Q8WZA2 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC22.26■■□□□ 1.15
RAPGEF4Q8WZA2 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC22.26■■□□□ 1.15
RAPGEF4Q8WZA2 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
RAPGEF4Q8WZA2 PPP6R2P1-201ENST00000450880 1275 ntBASIC22.26■■□□□ 1.15
RAPGEF4Q8WZA2 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC22.26■■□□□ 1.15
RAPGEF4Q8WZA2 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC22.26■■□□□ 1.15
RAPGEF4Q8WZA2 AC069120.2-201ENST00000524091 540 ntBASIC22.26■■□□□ 1.15
RAPGEF4Q8WZA2 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
RAPGEF4Q8WZA2 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC22.26■■□□□ 1.15
RAPGEF4Q8WZA2 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC22.26■■□□□ 1.15
RAPGEF4Q8WZA2 YTHDF3-AS1-201ENST00000603538 718 ntBASIC22.26■■□□□ 1.15
RAPGEF4Q8WZA2 AP001350.2-201ENST00000625104 1094 ntBASIC22.26■■□□□ 1.15
RAPGEF4Q8WZA2 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC22.26■■□□□ 1.15
RAPGEF4Q8WZA2 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
RAPGEF4Q8WZA2 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC22.26■■□□□ 1.15
RAPGEF4Q8WZA2 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
RAPGEF4Q8WZA2 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC22.26■■□□□ 1.15
RAPGEF4Q8WZA2 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
RAPGEF4Q8WZA2 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
RAPGEF4Q8WZA2 HTR7P1-202ENST00000624664 4411 ntBASIC22.26■■□□□ 1.15
RAPGEF4Q8WZA2 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC22.25■■□□□ 1.15
RAPGEF4Q8WZA2 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
RAPGEF4Q8WZA2 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC22.25■■□□□ 1.15
RAPGEF4Q8WZA2 AC244107.1-201ENST00000442033 332 ntBASIC22.25■■□□□ 1.15
RAPGEF4Q8WZA2 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
RAPGEF4Q8WZA2 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC22.25■■□□□ 1.15
RAPGEF4Q8WZA2 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC22.25■■□□□ 1.15
RAPGEF4Q8WZA2 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC22.25■■□□□ 1.15
RAPGEF4Q8WZA2 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
RAPGEF4Q8WZA2 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
RAPGEF4Q8WZA2 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
RAPGEF4Q8WZA2 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
RAPGEF4Q8WZA2 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
RAPGEF4Q8WZA2 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
RAPGEF4Q8WZA2 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
RAPGEF4Q8WZA2 AC016027.1-202ENST00000607927 1699 ntBASIC22.24■■□□□ 1.15
RAPGEF4Q8WZA2 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC22.24■■□□□ 1.15
RAPGEF4Q8WZA2 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC22.24■■□□□ 1.15
RAPGEF4Q8WZA2 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC22.24■■□□□ 1.15
RAPGEF4Q8WZA2 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC22.24■■□□□ 1.15
RAPGEF4Q8WZA2 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
RAPGEF4Q8WZA2 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
RAPGEF4Q8WZA2 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
RAPGEF4Q8WZA2 COPE-202ENST00000349893 948 ntTSL 2 BASIC22.24■■□□□ 1.15
RAPGEF4Q8WZA2 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
RAPGEF4Q8WZA2 AL512638.1-201ENST00000457493 794 ntBASIC22.24■■□□□ 1.15
RAPGEF4Q8WZA2 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
RAPGEF4Q8WZA2 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC22.24■■□□□ 1.15
RAPGEF4Q8WZA2 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC22.24■■□□□ 1.15
RAPGEF4Q8WZA2 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC22.24■■□□□ 1.15
RAPGEF4Q8WZA2 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC22.24■■□□□ 1.15
RAPGEF4Q8WZA2 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
RAPGEF4Q8WZA2 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC22.24■■□□□ 1.15
RAPGEF4Q8WZA2 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC22.24■■□□□ 1.15
RAPGEF4Q8WZA2 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
RAPGEF4Q8WZA2 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
RAPGEF4Q8WZA2 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
RAPGEF4Q8WZA2 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
RAPGEF4Q8WZA2 CD276-201ENST00000318424 2738 ntTSL 5 BASIC22.23■■□□□ 1.15
RAPGEF4Q8WZA2 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
RAPGEF4Q8WZA2 AC131009.4-201ENST00000624048 1740 ntBASIC22.23■■□□□ 1.15
RAPGEF4Q8WZA2 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
RAPGEF4Q8WZA2 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
RAPGEF4Q8WZA2 HARS-204ENST00000438307 1789 ntTSL 2 BASIC22.23■■□□□ 1.15
RAPGEF4Q8WZA2 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC22.23■■□□□ 1.15
RAPGEF4Q8WZA2 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
RAPGEF4Q8WZA2 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
RAPGEF4Q8WZA2 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC22.23■■□□□ 1.15
RAPGEF4Q8WZA2 CD81-202ENST00000381036 880 ntTSL 3 BASIC22.23■■□□□ 1.15
RAPGEF4Q8WZA2 RAC2-204ENST00000406508 893 ntTSL 5 BASIC22.23■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 57.6 ms