Protein–RNA interactions for Protein: Q8WVD3

RNF138, E3 ubiquitin-protein ligase RNF138, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF138Q8WVD3 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC15.36■□□□□ 0.05
RNF138Q8WVD3 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
RNF138Q8WVD3 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC15.36■□□□□ 0.05
RNF138Q8WVD3 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RNF138Q8WVD3 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC15.35■□□□□ 0.05
RNF138Q8WVD3 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RNF138Q8WVD3 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC15.35■□□□□ 0.05
RNF138Q8WVD3 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RNF138Q8WVD3 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RNF138Q8WVD3 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RNF138Q8WVD3 AC078925.2-201ENST00000624013 1973 ntBASIC15.35■□□□□ 0.05
RNF138Q8WVD3 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
RNF138Q8WVD3 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RNF138Q8WVD3 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC15.35■□□□□ 0.05
RNF138Q8WVD3 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RNF138Q8WVD3 AC022211.2-201ENST00000585075 2527 ntBASIC15.35■□□□□ 0.05
RNF138Q8WVD3 RNU1-129P-201ENST00000384064 167 ntBASIC15.35■□□□□ 0.05
RNF138Q8WVD3 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
RNF138Q8WVD3 AC074386.1-202ENST00000463561 864 ntBASIC15.35■□□□□ 0.05
RNF138Q8WVD3 HLA-J-202ENST00000469281 1241 ntBASIC15.35■□□□□ 0.05
RNF138Q8WVD3 SMN2-210ENST00000511812 867 ntTSL 2 BASIC15.35■□□□□ 0.05
RNF138Q8WVD3 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC15.35■□□□□ 0.05
RNF138Q8WVD3 U1.21-201ENST00000580816 167 ntBASIC15.35■□□□□ 0.05
RNF138Q8WVD3 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC15.35■□□□□ 0.05
RNF138Q8WVD3 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
RNF138Q8WVD3 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC15.35■□□□□ 0.05
RNF138Q8WVD3 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
RNF138Q8WVD3 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC15.35■□□□□ 0.05
RNF138Q8WVD3 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RNF138Q8WVD3 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
RNF138Q8WVD3 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RNF138Q8WVD3 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RNF138Q8WVD3 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
RNF138Q8WVD3 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC15.35■□□□□ 0.05
RNF138Q8WVD3 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC15.35■□□□□ 0.05
RNF138Q8WVD3 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RNF138Q8WVD3 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC15.35■□□□□ 0.05
RNF138Q8WVD3 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RNF138Q8WVD3 AIRN-201ENST00000601203 4374 ntBASIC15.34■□□□□ 0.05
RNF138Q8WVD3 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
RNF138Q8WVD3 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
RNF138Q8WVD3 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
RNF138Q8WVD3 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RNF138Q8WVD3 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RNF138Q8WVD3 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
RNF138Q8WVD3 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RNF138Q8WVD3 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RNF138Q8WVD3 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RNF138Q8WVD3 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RNF138Q8WVD3 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RNF138Q8WVD3 MIR940-201ENST00000401276 94 ntBASIC15.34■□□□□ 0.05
RNF138Q8WVD3 AC023274.1-201ENST00000418278 595 ntBASIC15.34■□□□□ 0.05
RNF138Q8WVD3 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC15.34■□□□□ 0.05
RNF138Q8WVD3 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC15.34■□□□□ 0.05
RNF138Q8WVD3 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RNF138Q8WVD3 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC15.34■□□□□ 0.05
RNF138Q8WVD3 AP002472.1-201ENST00000577490 586 ntBASIC15.34■□□□□ 0.05
RNF138Q8WVD3 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC15.34■□□□□ 0.05
RNF138Q8WVD3 AC068137.2-201ENST00000605408 478 ntBASIC15.34■□□□□ 0.05
RNF138Q8WVD3 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC15.34■□□□□ 0.05
RNF138Q8WVD3 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
RNF138Q8WVD3 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC15.34■□□□□ 0.05
RNF138Q8WVD3 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC15.34■□□□□ 0.05
RNF138Q8WVD3 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
RNF138Q8WVD3 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
RNF138Q8WVD3 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RNF138Q8WVD3 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
RNF138Q8WVD3 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
RNF138Q8WVD3 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RNF138Q8WVD3 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RNF138Q8WVD3 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RNF138Q8WVD3 KRT8P39-201ENST00000396270 1433 ntBASIC15.34■□□□□ 0.05
RNF138Q8WVD3 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
RNF138Q8WVD3 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC15.34■□□□□ 0.05
RNF138Q8WVD3 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC15.34■□□□□ 0.05
RNF138Q8WVD3 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RNF138Q8WVD3 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC15.33■□□□□ 0.05
RNF138Q8WVD3 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
RNF138Q8WVD3 AMT-206ENST00000458307 1860 ntTSL 2 BASIC15.33■□□□□ 0.05
RNF138Q8WVD3 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
RNF138Q8WVD3 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
RNF138Q8WVD3 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC15.33■□□□□ 0.05
RNF138Q8WVD3 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
RNF138Q8WVD3 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
RNF138Q8WVD3 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
RNF138Q8WVD3 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
RNF138Q8WVD3 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC15.33■□□□□ 0.04
RNF138Q8WVD3 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RNF138Q8WVD3 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RNF138Q8WVD3 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RNF138Q8WVD3 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
RNF138Q8WVD3 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
RNF138Q8WVD3 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
RNF138Q8WVD3 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RNF138Q8WVD3 YBX2P1-201ENST00000394192 760 ntBASIC15.33■□□□□ 0.04
RNF138Q8WVD3 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC15.33■□□□□ 0.04
RNF138Q8WVD3 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC15.33■□□□□ 0.04
RNF138Q8WVD3 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC15.33■□□□□ 0.04
RNF138Q8WVD3 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC15.33■□□□□ 0.04
RNF138Q8WVD3 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC15.33■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms