Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC17.65■□□□□ 0.42
PCDH19Q8TAB3 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
PCDH19Q8TAB3 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDH19Q8TAB3 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PCDH19Q8TAB3 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC17.65■□□□□ 0.42
PCDH19Q8TAB3 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC17.65■□□□□ 0.42
PCDH19Q8TAB3 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDH19Q8TAB3 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDH19Q8TAB3 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC17.65■□□□□ 0.42
PCDH19Q8TAB3 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC17.65■□□□□ 0.42
PCDH19Q8TAB3 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDH19Q8TAB3 NABP1-203ENST00000409510 843 ntTSL 5 BASIC17.65■□□□□ 0.42
PCDH19Q8TAB3 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC17.65■□□□□ 0.42
PCDH19Q8TAB3 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC17.65■□□□□ 0.42
PCDH19Q8TAB3 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDH19Q8TAB3 SCARNA2-201ENST00000458748 420 ntBASIC17.65■□□□□ 0.42
PCDH19Q8TAB3 AC079776.4-201ENST00000511039 504 ntBASIC17.65■□□□□ 0.42
PCDH19Q8TAB3 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
PCDH19Q8TAB3 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC17.65■□□□□ 0.42
PCDH19Q8TAB3 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC17.65■□□□□ 0.42
PCDH19Q8TAB3 VPS51-217ENST00000639871 243 ntTSL 5 BASIC17.65■□□□□ 0.42
PCDH19Q8TAB3 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PCDH19Q8TAB3 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
PCDH19Q8TAB3 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
PCDH19Q8TAB3 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PCDH19Q8TAB3 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDH19Q8TAB3 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDH19Q8TAB3 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDH19Q8TAB3 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.65■□□□□ 0.42
PCDH19Q8TAB3 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDH19Q8TAB3 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
PCDH19Q8TAB3 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC17.65■□□□□ 0.42
PCDH19Q8TAB3 AC243591.1-201ENST00000452967 1364 ntBASIC17.65■□□□□ 0.42
PCDH19Q8TAB3 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.42
PCDH19Q8TAB3 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.42
PCDH19Q8TAB3 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
PCDH19Q8TAB3 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
PCDH19Q8TAB3 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC17.64■□□□□ 0.41
PCDH19Q8TAB3 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDH19Q8TAB3 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDH19Q8TAB3 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
PCDH19Q8TAB3 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDH19Q8TAB3 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PCDH19Q8TAB3 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
PCDH19Q8TAB3 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDH19Q8TAB3 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PCDH19Q8TAB3 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDH19Q8TAB3 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC17.64■□□□□ 0.41
PCDH19Q8TAB3 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
PCDH19Q8TAB3 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
PCDH19Q8TAB3 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC17.64■□□□□ 0.41
PCDH19Q8TAB3 AL662844.1-201ENST00000546340 181 ntBASIC17.64■□□□□ 0.41
PCDH19Q8TAB3 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC17.64■□□□□ 0.41
PCDH19Q8TAB3 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC17.64■□□□□ 0.41
PCDH19Q8TAB3 AC139887.3-201ENST00000568585 713 ntBASIC17.64■□□□□ 0.41
PCDH19Q8TAB3 SDCCAG3P1-201ENST00000589292 1150 ntBASIC17.64■□□□□ 0.41
PCDH19Q8TAB3 CYGB-205ENST00000590175 830 ntTSL 3 BASIC17.64■□□□□ 0.41
PCDH19Q8TAB3 AC004706.3-202ENST00000621574 984 ntBASIC17.64■□□□□ 0.41
PCDH19Q8TAB3 TP73-AS1-207ENST00000624167 988 ntBASIC17.64■□□□□ 0.41
PCDH19Q8TAB3 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PCDH19Q8TAB3 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PCDH19Q8TAB3 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDH19Q8TAB3 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC17.64■□□□□ 0.41
PCDH19Q8TAB3 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.64■□□□□ 0.41
PCDH19Q8TAB3 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC17.64■□□□□ 0.41
PCDH19Q8TAB3 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDH19Q8TAB3 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDH19Q8TAB3 OS9-205ENST00000413095 1660 ntTSL 2 BASIC17.64■□□□□ 0.41
PCDH19Q8TAB3 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC17.64■□□□□ 0.41
PCDH19Q8TAB3 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PCDH19Q8TAB3 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC17.64■□□□□ 0.41
PCDH19Q8TAB3 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDH19Q8TAB3 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDH19Q8TAB3 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDH19Q8TAB3 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC17.63■□□□□ 0.41
PCDH19Q8TAB3 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDH19Q8TAB3 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PCDH19Q8TAB3 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDH19Q8TAB3 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PCDH19Q8TAB3 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
PCDH19Q8TAB3 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PCDH19Q8TAB3 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDH19Q8TAB3 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC17.63■□□□□ 0.41
PCDH19Q8TAB3 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PCDH19Q8TAB3 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC17.63■□□□□ 0.41
PCDH19Q8TAB3 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC17.63■□□□□ 0.41
PCDH19Q8TAB3 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC17.63■□□□□ 0.41
PCDH19Q8TAB3 MSRA-206ENST00000521209 814 ntTSL 3 BASIC17.63■□□□□ 0.41
PCDH19Q8TAB3 IRF8-202ENST00000562492 946 ntTSL 3 BASIC17.63■□□□□ 0.41
PCDH19Q8TAB3 TERC-201ENST00000602385 541 ntBASIC17.63■□□□□ 0.41
PCDH19Q8TAB3 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
PCDH19Q8TAB3 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDH19Q8TAB3 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDH19Q8TAB3 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDH19Q8TAB3 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC17.63■□□□□ 0.41
PCDH19Q8TAB3 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
PCDH19Q8TAB3 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDH19Q8TAB3 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PCDH19Q8TAB3 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
PCDH19Q8TAB3 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms