Protein–RNA interactions for Protein: Q8NEF9

SRFBP1, Serum response factor-binding protein 1, humanhuman

Known RBP Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1Q8NEF9 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
SRFBP1Q8NEF9 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
SRFBP1Q8NEF9 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC16.33■□□□□ 0.2
SRFBP1Q8NEF9 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SRFBP1Q8NEF9 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC16.33■□□□□ 0.2
SRFBP1Q8NEF9 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC16.33■□□□□ 0.2
SRFBP1Q8NEF9 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC16.33■□□□□ 0.2
SRFBP1Q8NEF9 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC16.33■□□□□ 0.2
SRFBP1Q8NEF9 RNPS1P1-201ENST00000507437 918 ntBASIC16.33■□□□□ 0.2
SRFBP1Q8NEF9 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC16.33■□□□□ 0.2
SRFBP1Q8NEF9 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC16.33■□□□□ 0.2
SRFBP1Q8NEF9 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC16.33■□□□□ 0.2
SRFBP1Q8NEF9 VPS51-217ENST00000639871 243 ntTSL 5 BASIC16.33■□□□□ 0.2
SRFBP1Q8NEF9 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SRFBP1Q8NEF9 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SRFBP1Q8NEF9 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
SRFBP1Q8NEF9 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SRFBP1Q8NEF9 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
SRFBP1Q8NEF9 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
SRFBP1Q8NEF9 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
SRFBP1Q8NEF9 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC16.33■□□□□ 0.2
SRFBP1Q8NEF9 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SRFBP1Q8NEF9 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
SRFBP1Q8NEF9 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC16.33■□□□□ 0.2
SRFBP1Q8NEF9 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SRFBP1Q8NEF9 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC16.33■□□□□ 0.2
SRFBP1Q8NEF9 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SRFBP1Q8NEF9 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SRFBP1Q8NEF9 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
SRFBP1Q8NEF9 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
SRFBP1Q8NEF9 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SRFBP1Q8NEF9 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
SRFBP1Q8NEF9 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SRFBP1Q8NEF9 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SRFBP1Q8NEF9 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SRFBP1Q8NEF9 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
SRFBP1Q8NEF9 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SRFBP1Q8NEF9 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SRFBP1Q8NEF9 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SRFBP1Q8NEF9 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
SRFBP1Q8NEF9 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SRFBP1Q8NEF9 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
SRFBP1Q8NEF9 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
SRFBP1Q8NEF9 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
SRFBP1Q8NEF9 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SRFBP1Q8NEF9 KRT18P67-201ENST00000432816 1264 ntBASIC16.32■□□□□ 0.2
SRFBP1Q8NEF9 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SRFBP1Q8NEF9 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC16.32■□□□□ 0.2
SRFBP1Q8NEF9 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SRFBP1Q8NEF9 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC16.32■□□□□ 0.2
SRFBP1Q8NEF9 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SRFBP1Q8NEF9 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC16.32■□□□□ 0.2
SRFBP1Q8NEF9 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC16.32■□□□□ 0.2
SRFBP1Q8NEF9 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC16.32■□□□□ 0.2
SRFBP1Q8NEF9 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC16.32■□□□□ 0.2
SRFBP1Q8NEF9 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SRFBP1Q8NEF9 SDCCAG3P1-201ENST00000589292 1150 ntBASIC16.32■□□□□ 0.2
SRFBP1Q8NEF9 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC16.32■□□□□ 0.2
SRFBP1Q8NEF9 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
SRFBP1Q8NEF9 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
SRFBP1Q8NEF9 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SRFBP1Q8NEF9 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SRFBP1Q8NEF9 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
SRFBP1Q8NEF9 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC16.32■□□□□ 0.2
SRFBP1Q8NEF9 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
SRFBP1Q8NEF9 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC16.31■□□□□ 0.2
SRFBP1Q8NEF9 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
SRFBP1Q8NEF9 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
SRFBP1Q8NEF9 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SRFBP1Q8NEF9 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SRFBP1Q8NEF9 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SRFBP1Q8NEF9 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SRFBP1Q8NEF9 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC16.31■□□□□ 0.2
SRFBP1Q8NEF9 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
SRFBP1Q8NEF9 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SRFBP1Q8NEF9 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SRFBP1Q8NEF9 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
SRFBP1Q8NEF9 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SRFBP1Q8NEF9 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC16.31■□□□□ 0.2
SRFBP1Q8NEF9 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
SRFBP1Q8NEF9 STX3-203ENST00000529177 1571 ntTSL 2 BASIC16.31■□□□□ 0.2
SRFBP1Q8NEF9 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SRFBP1Q8NEF9 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
SRFBP1Q8NEF9 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SRFBP1Q8NEF9 AC011270.2-201ENST00000624293 2550 ntBASIC16.31■□□□□ 0.2
SRFBP1Q8NEF9 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC16.31■□□□□ 0.2
SRFBP1Q8NEF9 INIP-202ENST00000374236 874 ntTSL 2 BASIC16.31■□□□□ 0.2
SRFBP1Q8NEF9 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SRFBP1Q8NEF9 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SRFBP1Q8NEF9 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC16.31■□□□□ 0.2
SRFBP1Q8NEF9 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC16.31■□□□□ 0.2
SRFBP1Q8NEF9 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
SRFBP1Q8NEF9 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC16.31■□□□□ 0.2
SRFBP1Q8NEF9 PGM5P2-202ENST00000637225 1043 ntBASIC16.31■□□□□ 0.2
SRFBP1Q8NEF9 AF228730.7-201ENST00000641842 219 ntBASIC16.31■□□□□ 0.2
SRFBP1Q8NEF9 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SRFBP1Q8NEF9 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
SRFBP1Q8NEF9 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SRFBP1Q8NEF9 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SRFBP1Q8NEF9 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms