Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TRIM48Q8IWZ4 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TRIM48Q8IWZ4 LBH-204ENST00000406087 559 ntTSL 4 BASIC16.82■□□□□ 0.28
TRIM48Q8IWZ4 CRCP-205ENST00000431089 942 ntTSL 2 BASIC16.82■□□□□ 0.28
TRIM48Q8IWZ4 AC007967.2-201ENST00000432613 625 ntBASIC16.82■□□□□ 0.28
TRIM48Q8IWZ4 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TRIM48Q8IWZ4 KRT18P3-201ENST00000451602 1288 ntBASIC16.82■□□□□ 0.28
TRIM48Q8IWZ4 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC16.82■□□□□ 0.28
TRIM48Q8IWZ4 AC108073.2-201ENST00000464002 357 ntBASIC16.82■□□□□ 0.28
TRIM48Q8IWZ4 TCAP-202ENST00000578283 583 ntTSL 5 BASIC16.82■□□□□ 0.28
TRIM48Q8IWZ4 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRIM48Q8IWZ4 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
TRIM48Q8IWZ4 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC16.82■□□□□ 0.28
TRIM48Q8IWZ4 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC16.82■□□□□ 0.28
TRIM48Q8IWZ4 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRIM48Q8IWZ4 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRIM48Q8IWZ4 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRIM48Q8IWZ4 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TRIM48Q8IWZ4 AC134043.2-201ENST00000624206 2238 ntBASIC16.82■□□□□ 0.28
TRIM48Q8IWZ4 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRIM48Q8IWZ4 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRIM48Q8IWZ4 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRIM48Q8IWZ4 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRIM48Q8IWZ4 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
TRIM48Q8IWZ4 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TRIM48Q8IWZ4 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRIM48Q8IWZ4 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC16.81■□□□□ 0.28
TRIM48Q8IWZ4 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC16.81■□□□□ 0.28
TRIM48Q8IWZ4 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
TRIM48Q8IWZ4 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
TRIM48Q8IWZ4 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
TRIM48Q8IWZ4 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRIM48Q8IWZ4 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRIM48Q8IWZ4 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRIM48Q8IWZ4 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRIM48Q8IWZ4 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRIM48Q8IWZ4 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TRIM48Q8IWZ4 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TRIM48Q8IWZ4 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC16.81■□□□□ 0.28
TRIM48Q8IWZ4 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC16.81■□□□□ 0.28
TRIM48Q8IWZ4 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRIM48Q8IWZ4 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC16.81■□□□□ 0.28
TRIM48Q8IWZ4 AP002414.1-201ENST00000391405 1147 ntBASIC16.81■□□□□ 0.28
TRIM48Q8IWZ4 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
TRIM48Q8IWZ4 PTCHD3P3-201ENST00000403073 906 ntBASIC16.81■□□□□ 0.28
TRIM48Q8IWZ4 CRYGEP-201ENST00000412192 528 ntBASIC16.81■□□□□ 0.28
TRIM48Q8IWZ4 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC16.81■□□□□ 0.28
TRIM48Q8IWZ4 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC16.81■□□□□ 0.28
TRIM48Q8IWZ4 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC16.81■□□□□ 0.28
TRIM48Q8IWZ4 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRIM48Q8IWZ4 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC16.81■□□□□ 0.28
TRIM48Q8IWZ4 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC16.81■□□□□ 0.28
TRIM48Q8IWZ4 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRIM48Q8IWZ4 AC008667.4-201ENST00000607370 168 ntBASIC16.81■□□□□ 0.28
TRIM48Q8IWZ4 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
TRIM48Q8IWZ4 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
TRIM48Q8IWZ4 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRIM48Q8IWZ4 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRIM48Q8IWZ4 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
TRIM48Q8IWZ4 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC16.81■□□□□ 0.28
TRIM48Q8IWZ4 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRIM48Q8IWZ4 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC16.81■□□□□ 0.28
TRIM48Q8IWZ4 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRIM48Q8IWZ4 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRIM48Q8IWZ4 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRIM48Q8IWZ4 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
TRIM48Q8IWZ4 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TRIM48Q8IWZ4 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRIM48Q8IWZ4 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRIM48Q8IWZ4 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRIM48Q8IWZ4 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC16.81■□□□□ 0.28
TRIM48Q8IWZ4 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
TRIM48Q8IWZ4 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
TRIM48Q8IWZ4 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC16.8■□□□□ 0.28
TRIM48Q8IWZ4 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM48Q8IWZ4 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM48Q8IWZ4 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC16.8■□□□□ 0.28
TRIM48Q8IWZ4 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM48Q8IWZ4 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM48Q8IWZ4 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM48Q8IWZ4 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC16.8■□□□□ 0.28
TRIM48Q8IWZ4 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC16.8■□□□□ 0.28
TRIM48Q8IWZ4 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
TRIM48Q8IWZ4 PI4KAP1-204ENST00000612579 1703 ntBASIC16.8■□□□□ 0.28
TRIM48Q8IWZ4 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
TRIM48Q8IWZ4 IGHV3-65-201ENST00000523210 341 ntBASIC16.8■□□□□ 0.28
TRIM48Q8IWZ4 GGTLC5P-201ENST00000617623 998 ntBASIC16.8■□□□□ 0.28
TRIM48Q8IWZ4 AC023511.2-201ENST00000618803 211 ntBASIC16.8■□□□□ 0.28
TRIM48Q8IWZ4 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
TRIM48Q8IWZ4 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM48Q8IWZ4 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC16.8■□□□□ 0.28
TRIM48Q8IWZ4 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM48Q8IWZ4 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM48Q8IWZ4 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM48Q8IWZ4 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM48Q8IWZ4 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
TRIM48Q8IWZ4 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
TRIM48Q8IWZ4 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC16.8■□□□□ 0.28
TRIM48Q8IWZ4 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
TRIM48Q8IWZ4 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 57.9 ms