Protein–RNA interactions for Protein: Q8IWD4

CCDC117, Coiled-coil domain-containing protein 117, humanhuman

Predicted RBP Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC117Q8IWD4 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC117Q8IWD4 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC117Q8IWD4 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC117Q8IWD4 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC17.79■□□□□ 0.44
CCDC117Q8IWD4 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
CCDC117Q8IWD4 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC17.79■□□□□ 0.44
CCDC117Q8IWD4 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC117Q8IWD4 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC117Q8IWD4 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC117Q8IWD4 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC117Q8IWD4 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC117Q8IWD4 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
CCDC117Q8IWD4 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC117Q8IWD4 NABP1-203ENST00000409510 843 ntTSL 5 BASIC17.79■□□□□ 0.44
CCDC117Q8IWD4 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
CCDC117Q8IWD4 AP000347.1-202ENST00000435868 847 ntBASIC17.79■□□□□ 0.44
CCDC117Q8IWD4 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC17.79■□□□□ 0.44
CCDC117Q8IWD4 SLC25A1P1-201ENST00000528351 927 ntBASIC17.79■□□□□ 0.44
CCDC117Q8IWD4 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC17.79■□□□□ 0.44
CCDC117Q8IWD4 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC17.79■□□□□ 0.44
CCDC117Q8IWD4 AC145285.3-201ENST00000564603 959 ntBASIC17.79■□□□□ 0.44
CCDC117Q8IWD4 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC117Q8IWD4 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC17.79■□□□□ 0.44
CCDC117Q8IWD4 GPR89P-201ENST00000407924 1495 ntBASIC17.79■□□□□ 0.44
CCDC117Q8IWD4 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
CCDC117Q8IWD4 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC117Q8IWD4 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC117Q8IWD4 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
CCDC117Q8IWD4 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC117Q8IWD4 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17.79■□□□□ 0.44
CCDC117Q8IWD4 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC117Q8IWD4 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC117Q8IWD4 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
CCDC117Q8IWD4 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC117Q8IWD4 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC117Q8IWD4 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC117Q8IWD4 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC117Q8IWD4 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC117Q8IWD4 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
CCDC117Q8IWD4 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
CCDC117Q8IWD4 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC117Q8IWD4 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC117Q8IWD4 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC17.78■□□□□ 0.44
CCDC117Q8IWD4 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17.78■□□□□ 0.44
CCDC117Q8IWD4 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
CCDC117Q8IWD4 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC117Q8IWD4 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC117Q8IWD4 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
CCDC117Q8IWD4 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
CCDC117Q8IWD4 AC073621.1-201ENST00000392730 636 ntBASIC17.78■□□□□ 0.44
CCDC117Q8IWD4 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC17.78■□□□□ 0.44
CCDC117Q8IWD4 MIR940-201ENST00000401276 94 ntBASIC17.78■□□□□ 0.44
CCDC117Q8IWD4 ELK2BP-201ENST00000415014 1224 ntBASIC17.78■□□□□ 0.44
CCDC117Q8IWD4 AL591424.1-201ENST00000442569 1213 ntBASIC17.78■□□□□ 0.44
CCDC117Q8IWD4 UNC93B6-202ENST00000528242 690 ntBASIC17.78■□□□□ 0.44
CCDC117Q8IWD4 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC17.78■□□□□ 0.44
CCDC117Q8IWD4 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC117Q8IWD4 RPL18-209ENST00000550645 463 ntTSL 5 BASIC17.78■□□□□ 0.44
CCDC117Q8IWD4 RPL18-214ENST00000552588 559 ntTSL 3 BASIC17.78■□□□□ 0.44
CCDC117Q8IWD4 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC17.78■□□□□ 0.44
CCDC117Q8IWD4 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC17.78■□□□□ 0.44
CCDC117Q8IWD4 PIN1-206ENST00000587625 878 ntTSL 2 BASIC17.78■□□□□ 0.44
CCDC117Q8IWD4 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC117Q8IWD4 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC17.78■□□□□ 0.44
CCDC117Q8IWD4 TERC-201ENST00000602385 541 ntBASIC17.78■□□□□ 0.44
CCDC117Q8IWD4 AC027601.4-201ENST00000611259 610 ntBASIC17.78■□□□□ 0.44
CCDC117Q8IWD4 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
CCDC117Q8IWD4 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC117Q8IWD4 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC117Q8IWD4 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC117Q8IWD4 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC117Q8IWD4 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC17.78■□□□□ 0.44
CCDC117Q8IWD4 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC17.78■□□□□ 0.44
CCDC117Q8IWD4 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC17.78■□□□□ 0.44
CCDC117Q8IWD4 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.78■□□□□ 0.44
CCDC117Q8IWD4 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC17.77■□□□□ 0.44
CCDC117Q8IWD4 AL135999.2-201ENST00000622438 1686 ntBASIC17.77■□□□□ 0.44
CCDC117Q8IWD4 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC17.77■□□□□ 0.44
CCDC117Q8IWD4 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC117Q8IWD4 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC17.77■□□□□ 0.44
CCDC117Q8IWD4 CROCCP2-202ENST00000412962 2773 ntBASIC17.77■□□□□ 0.44
CCDC117Q8IWD4 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC17.77■□□□□ 0.44
CCDC117Q8IWD4 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC117Q8IWD4 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC117Q8IWD4 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC17.77■□□□□ 0.44
CCDC117Q8IWD4 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC17.77■□□□□ 0.44
CCDC117Q8IWD4 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
CCDC117Q8IWD4 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
CCDC117Q8IWD4 AC108751.1-201ENST00000490852 363 ntBASIC17.77■□□□□ 0.44
CCDC117Q8IWD4 RPS15P9-201ENST00000494093 319 ntBASIC17.77■□□□□ 0.44
CCDC117Q8IWD4 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC17.77■□□□□ 0.44
CCDC117Q8IWD4 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC117Q8IWD4 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC17.77■□□□□ 0.44
CCDC117Q8IWD4 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
CCDC117Q8IWD4 AL353135.1-201ENST00000606729 504 ntBASIC17.77■□□□□ 0.44
CCDC117Q8IWD4 GGTLC5P-201ENST00000617623 998 ntBASIC17.77■□□□□ 0.44
CCDC117Q8IWD4 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.44
CCDC117Q8IWD4 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
CCDC117Q8IWD4 AC006504.4-201ENST00000592118 1568 ntBASIC17.77■□□□□ 0.44
CCDC117Q8IWD4 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC17.77■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms