Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC18.12■□□□□ 0.49
CCDC50Q8IVM0 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC50Q8IVM0 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC50Q8IVM0 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC50Q8IVM0 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC18.12■□□□□ 0.49
CCDC50Q8IVM0 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC50Q8IVM0 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC50Q8IVM0 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC50Q8IVM0 MEG3-211ENST00000452514 461 ntTSL 3 BASIC18.12■□□□□ 0.49
CCDC50Q8IVM0 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC18.12■□□□□ 0.49
CCDC50Q8IVM0 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC18.12■□□□□ 0.49
CCDC50Q8IVM0 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC18.12■□□□□ 0.49
CCDC50Q8IVM0 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC18.12■□□□□ 0.49
CCDC50Q8IVM0 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC18.12■□□□□ 0.49
CCDC50Q8IVM0 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC50Q8IVM0 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC50Q8IVM0 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC18.12■□□□□ 0.49
CCDC50Q8IVM0 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC50Q8IVM0 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC50Q8IVM0 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC18.12■□□□□ 0.49
CCDC50Q8IVM0 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC50Q8IVM0 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC18.12■□□□□ 0.49
CCDC50Q8IVM0 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC18.12■□□□□ 0.49
CCDC50Q8IVM0 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC50Q8IVM0 PCDHA1-201ENST00000378133 2726 ntBASIC18.12■□□□□ 0.49
CCDC50Q8IVM0 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC50Q8IVM0 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC50Q8IVM0 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC50Q8IVM0 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC50Q8IVM0 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC50Q8IVM0 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC50Q8IVM0 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC18.12■□□□□ 0.49
CCDC50Q8IVM0 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC50Q8IVM0 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC18.11■□□□□ 0.49
CCDC50Q8IVM0 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC50Q8IVM0 AC105020.1-201ENST00000435356 2205 ntBASIC18.11■□□□□ 0.49
CCDC50Q8IVM0 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC50Q8IVM0 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
CCDC50Q8IVM0 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC50Q8IVM0 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
CCDC50Q8IVM0 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC18.11■□□□□ 0.49
CCDC50Q8IVM0 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC50Q8IVM0 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC50Q8IVM0 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC18.11■□□□□ 0.49
CCDC50Q8IVM0 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC50Q8IVM0 FXN-203ENST00000396366 922 ntTSL 2 BASIC18.11■□□□□ 0.49
CCDC50Q8IVM0 AL031133.1-201ENST00000406807 723 ntBASIC18.11■□□□□ 0.49
CCDC50Q8IVM0 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC18.11■□□□□ 0.49
CCDC50Q8IVM0 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC18.11■□□□□ 0.49
CCDC50Q8IVM0 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC18.11■□□□□ 0.49
CCDC50Q8IVM0 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC50Q8IVM0 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC18.11■□□□□ 0.49
CCDC50Q8IVM0 AL121672.3-201ENST00000608644 468 ntBASIC18.11■□□□□ 0.49
CCDC50Q8IVM0 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC18.11■□□□□ 0.49
CCDC50Q8IVM0 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC50Q8IVM0 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC50Q8IVM0 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC18.11■□□□□ 0.49
CCDC50Q8IVM0 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC18.11■□□□□ 0.49
CCDC50Q8IVM0 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC50Q8IVM0 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC50Q8IVM0 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC50Q8IVM0 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
CCDC50Q8IVM0 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC50Q8IVM0 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC50Q8IVM0 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC50Q8IVM0 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
CCDC50Q8IVM0 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC50Q8IVM0 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
CCDC50Q8IVM0 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC50Q8IVM0 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC50Q8IVM0 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC50Q8IVM0 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC50Q8IVM0 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC50Q8IVM0 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC18.1■□□□□ 0.49
CCDC50Q8IVM0 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC50Q8IVM0 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC18.1■□□□□ 0.49
CCDC50Q8IVM0 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC50Q8IVM0 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC50Q8IVM0 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC50Q8IVM0 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC50Q8IVM0 FUT8-AS1-201ENST00000621019 1521 ntBASIC18.1■□□□□ 0.49
CCDC50Q8IVM0 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC50Q8IVM0 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC50Q8IVM0 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC50Q8IVM0 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC18.1■□□□□ 0.49
CCDC50Q8IVM0 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC18.1■□□□□ 0.49
CCDC50Q8IVM0 CHCHD2P8-201ENST00000429873 447 ntBASIC18.1■□□□□ 0.49
CCDC50Q8IVM0 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC18.1■□□□□ 0.49
CCDC50Q8IVM0 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC50Q8IVM0 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC18.1■□□□□ 0.49
CCDC50Q8IVM0 NTF6B-201ENST00000591913 560 ntBASIC18.1■□□□□ 0.49
CCDC50Q8IVM0 AL121956.5-201ENST00000625261 221 ntBASIC18.1■□□□□ 0.49
CCDC50Q8IVM0 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC50Q8IVM0 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC18.1■□□□□ 0.49
CCDC50Q8IVM0 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC18.1■□□□□ 0.49
CCDC50Q8IVM0 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC50Q8IVM0 AGGF1P2-201ENST00000426656 2106 ntBASIC18.1■□□□□ 0.49
CCDC50Q8IVM0 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC50Q8IVM0 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC50Q8IVM0 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms