Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RNF135Q8IUD6 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RNF135Q8IUD6 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
RNF135Q8IUD6 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC18.15■□□□□ 0.5
RNF135Q8IUD6 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
RNF135Q8IUD6 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC18.15■□□□□ 0.5
RNF135Q8IUD6 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC18.15■□□□□ 0.5
RNF135Q8IUD6 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
RNF135Q8IUD6 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RNF135Q8IUD6 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
RNF135Q8IUD6 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC18.15■□□□□ 0.5
RNF135Q8IUD6 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RNF135Q8IUD6 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RNF135Q8IUD6 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC18.15■□□□□ 0.5
RNF135Q8IUD6 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
RNF135Q8IUD6 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
RNF135Q8IUD6 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC18.15■□□□□ 0.5
RNF135Q8IUD6 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
RNF135Q8IUD6 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC18.15■□□□□ 0.5
RNF135Q8IUD6 DUTP2-201ENST00000519164 463 ntBASIC18.15■□□□□ 0.5
RNF135Q8IUD6 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC18.15■□□□□ 0.5
RNF135Q8IUD6 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC18.15■□□□□ 0.5
RNF135Q8IUD6 OR7E47P-204ENST00000575924 449 ntBASIC18.15■□□□□ 0.5
RNF135Q8IUD6 RN7SL204P-201ENST00000582831 262 ntBASIC18.15■□□□□ 0.5
RNF135Q8IUD6 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC18.15■□□□□ 0.5
RNF135Q8IUD6 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
RNF135Q8IUD6 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC18.15■□□□□ 0.5
RNF135Q8IUD6 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
RNF135Q8IUD6 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RNF135Q8IUD6 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RNF135Q8IUD6 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC18.15■□□□□ 0.5
RNF135Q8IUD6 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC18.15■□□□□ 0.5
RNF135Q8IUD6 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
RNF135Q8IUD6 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RNF135Q8IUD6 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC18.15■□□□□ 0.5
RNF135Q8IUD6 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC18.14■□□□□ 0.5
RNF135Q8IUD6 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.5
RNF135Q8IUD6 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RNF135Q8IUD6 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC18.14■□□□□ 0.49
RNF135Q8IUD6 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
RNF135Q8IUD6 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC18.14■□□□□ 0.49
RNF135Q8IUD6 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC18.14■□□□□ 0.49
RNF135Q8IUD6 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
RNF135Q8IUD6 AC148477.5-201ENST00000625164 1645 ntBASIC18.14■□□□□ 0.49
RNF135Q8IUD6 LTB4R2-202ENST00000528054 3092 ntBASIC18.14■□□□□ 0.49
RNF135Q8IUD6 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
RNF135Q8IUD6 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RNF135Q8IUD6 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RNF135Q8IUD6 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RNF135Q8IUD6 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
RNF135Q8IUD6 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC18.14■□□□□ 0.49
RNF135Q8IUD6 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC18.14■□□□□ 0.49
RNF135Q8IUD6 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC18.14■□□□□ 0.49
RNF135Q8IUD6 BASP1P1-201ENST00000430708 665 ntBASIC18.14■□□□□ 0.49
RNF135Q8IUD6 TSPY16P-201ENST00000449843 468 ntBASIC18.14■□□□□ 0.49
RNF135Q8IUD6 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
RNF135Q8IUD6 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RNF135Q8IUD6 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC18.14■□□□□ 0.49
RNF135Q8IUD6 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC18.14■□□□□ 0.49
RNF135Q8IUD6 YTHDF3-AS1-201ENST00000603538 718 ntBASIC18.14■□□□□ 0.49
RNF135Q8IUD6 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
RNF135Q8IUD6 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RNF135Q8IUD6 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RNF135Q8IUD6 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RNF135Q8IUD6 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC18.14■□□□□ 0.49
RNF135Q8IUD6 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC18.14■□□□□ 0.49
RNF135Q8IUD6 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC18.14■□□□□ 0.49
RNF135Q8IUD6 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC18.14■□□□□ 0.49
RNF135Q8IUD6 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC18.14■□□□□ 0.49
RNF135Q8IUD6 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RNF135Q8IUD6 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
RNF135Q8IUD6 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RNF135Q8IUD6 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RNF135Q8IUD6 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RNF135Q8IUD6 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RNF135Q8IUD6 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
RNF135Q8IUD6 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC18.14■□□□□ 0.49
RNF135Q8IUD6 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC18.14■□□□□ 0.49
RNF135Q8IUD6 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RNF135Q8IUD6 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC18.14■□□□□ 0.49
RNF135Q8IUD6 GATB-213ENST00000515812 1893 ntTSL 5 BASIC18.14■□□□□ 0.49
RNF135Q8IUD6 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC18.13■□□□□ 0.49
RNF135Q8IUD6 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC18.13■□□□□ 0.49
RNF135Q8IUD6 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
RNF135Q8IUD6 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC18.13■□□□□ 0.49
RNF135Q8IUD6 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
RNF135Q8IUD6 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC18.13■□□□□ 0.49
RNF135Q8IUD6 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC18.13■□□□□ 0.49
RNF135Q8IUD6 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RNF135Q8IUD6 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
RNF135Q8IUD6 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC18.13■□□□□ 0.49
RNF135Q8IUD6 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RNF135Q8IUD6 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RNF135Q8IUD6 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC18.13■□□□□ 0.49
RNF135Q8IUD6 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
RNF135Q8IUD6 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RNF135Q8IUD6 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RNF135Q8IUD6 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC18.13■□□□□ 0.49
RNF135Q8IUD6 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC18.13■□□□□ 0.49
RNF135Q8IUD6 AC134043.2-201ENST00000624206 2238 ntBASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms