Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
LRRTM4Q86VH4 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
LRRTM4Q86VH4 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC16.75■□□□□ 0.27
LRRTM4Q86VH4 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
LRRTM4Q86VH4 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LRRTM4Q86VH4 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC16.75■□□□□ 0.27
LRRTM4Q86VH4 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
LRRTM4Q86VH4 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC16.75■□□□□ 0.27
LRRTM4Q86VH4 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC16.75■□□□□ 0.27
LRRTM4Q86VH4 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC16.75■□□□□ 0.27
LRRTM4Q86VH4 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
LRRTM4Q86VH4 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LRRTM4Q86VH4 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LRRTM4Q86VH4 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
LRRTM4Q86VH4 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC16.75■□□□□ 0.27
LRRTM4Q86VH4 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC16.75■□□□□ 0.27
LRRTM4Q86VH4 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC16.75■□□□□ 0.27
LRRTM4Q86VH4 KRT18P2-201ENST00000447938 1258 ntBASIC16.75■□□□□ 0.27
LRRTM4Q86VH4 CXCL1P1-201ENST00000502804 216 ntBASIC16.75■□□□□ 0.27
LRRTM4Q86VH4 PGAM5P1-201ENST00000518923 814 ntBASIC16.75■□□□□ 0.27
LRRTM4Q86VH4 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC16.75■□□□□ 0.27
LRRTM4Q86VH4 AC096734.2-201ENST00000562054 433 ntBASIC16.75■□□□□ 0.27
LRRTM4Q86VH4 AC040169.1-201ENST00000565382 521 ntBASIC16.75■□□□□ 0.27
LRRTM4Q86VH4 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC16.75■□□□□ 0.27
LRRTM4Q86VH4 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC16.75■□□□□ 0.27
LRRTM4Q86VH4 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
LRRTM4Q86VH4 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC16.75■□□□□ 0.27
LRRTM4Q86VH4 AC010507.1-201ENST00000633895 436 ntBASIC16.75■□□□□ 0.27
LRRTM4Q86VH4 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
LRRTM4Q86VH4 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
LRRTM4Q86VH4 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LRRTM4Q86VH4 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC16.75■□□□□ 0.27
LRRTM4Q86VH4 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC16.75■□□□□ 0.27
LRRTM4Q86VH4 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LRRTM4Q86VH4 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
LRRTM4Q86VH4 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
LRRTM4Q86VH4 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC16.75■□□□□ 0.27
LRRTM4Q86VH4 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LRRTM4Q86VH4 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LRRTM4Q86VH4 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LRRTM4Q86VH4 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LRRTM4Q86VH4 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
LRRTM4Q86VH4 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LRRTM4Q86VH4 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
LRRTM4Q86VH4 STX3-203ENST00000529177 1571 ntTSL 2 BASIC16.74■□□□□ 0.27
LRRTM4Q86VH4 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC16.74■□□□□ 0.27
LRRTM4Q86VH4 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LRRTM4Q86VH4 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LRRTM4Q86VH4 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LRRTM4Q86VH4 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
LRRTM4Q86VH4 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC16.74■□□□□ 0.27
LRRTM4Q86VH4 HNRNPA1P28-201ENST00000424481 961 ntBASIC16.74■□□□□ 0.27
LRRTM4Q86VH4 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC16.74■□□□□ 0.27
LRRTM4Q86VH4 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC16.74■□□□□ 0.27
LRRTM4Q86VH4 AC124947.2-201ENST00000547118 1133 ntBASIC16.74■□□□□ 0.27
LRRTM4Q86VH4 AC018845.2-201ENST00000568326 409 ntBASIC16.74■□□□□ 0.27
LRRTM4Q86VH4 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC16.74■□□□□ 0.27
LRRTM4Q86VH4 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LRRTM4Q86VH4 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
LRRTM4Q86VH4 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LRRTM4Q86VH4 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
LRRTM4Q86VH4 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
LRRTM4Q86VH4 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC16.74■□□□□ 0.27
LRRTM4Q86VH4 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
LRRTM4Q86VH4 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC16.74■□□□□ 0.27
LRRTM4Q86VH4 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC16.74■□□□□ 0.27
LRRTM4Q86VH4 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
LRRTM4Q86VH4 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
LRRTM4Q86VH4 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC16.74■□□□□ 0.27
LRRTM4Q86VH4 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LRRTM4Q86VH4 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
LRRTM4Q86VH4 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
LRRTM4Q86VH4 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LRRTM4Q86VH4 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LRRTM4Q86VH4 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC16.73■□□□□ 0.27
LRRTM4Q86VH4 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LRRTM4Q86VH4 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
LRRTM4Q86VH4 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
LRRTM4Q86VH4 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
LRRTM4Q86VH4 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC16.73■□□□□ 0.27
LRRTM4Q86VH4 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC16.73■□□□□ 0.27
LRRTM4Q86VH4 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC16.73■□□□□ 0.27
LRRTM4Q86VH4 MAL2-202ENST00000531508 892 ntTSL 3 BASIC16.73■□□□□ 0.27
LRRTM4Q86VH4 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC16.73■□□□□ 0.27
LRRTM4Q86VH4 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC16.73■□□□□ 0.27
LRRTM4Q86VH4 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC16.73■□□□□ 0.27
LRRTM4Q86VH4 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC16.73■□□□□ 0.27
LRRTM4Q86VH4 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LRRTM4Q86VH4 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LRRTM4Q86VH4 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LRRTM4Q86VH4 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LRRTM4Q86VH4 BANP-227ENST00000626016 2144 ntTSL 2 BASIC16.73■□□□□ 0.27
LRRTM4Q86VH4 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LRRTM4Q86VH4 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LRRTM4Q86VH4 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC16.73■□□□□ 0.27
LRRTM4Q86VH4 CYP51A1P2-201ENST00000419457 1499 ntBASIC16.73■□□□□ 0.27
LRRTM4Q86VH4 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC16.73■□□□□ 0.27
LRRTM4Q86VH4 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LRRTM4Q86VH4 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
LRRTM4Q86VH4 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms