Protein–RNA interactions for Protein: Q86TJ5

ZNF554, Zinc finger protein 554, humanhuman

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF554Q86TJ5 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
ZNF554Q86TJ5 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
ZNF554Q86TJ5 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
ZNF554Q86TJ5 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC15.53■□□□□ 0.08
ZNF554Q86TJ5 AC005089.1-201ENST00000619486 2241 ntBASIC15.53■□□□□ 0.08
ZNF554Q86TJ5 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
ZNF554Q86TJ5 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
ZNF554Q86TJ5 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC15.53■□□□□ 0.08
ZNF554Q86TJ5 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC15.53■□□□□ 0.08
ZNF554Q86TJ5 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC15.53■□□□□ 0.08
ZNF554Q86TJ5 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC15.53■□□□□ 0.08
ZNF554Q86TJ5 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
ZNF554Q86TJ5 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
ZNF554Q86TJ5 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
ZNF554Q86TJ5 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC15.53■□□□□ 0.08
ZNF554Q86TJ5 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
ZNF554Q86TJ5 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
ZNF554Q86TJ5 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
ZNF554Q86TJ5 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
ZNF554Q86TJ5 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
ZNF554Q86TJ5 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC15.52■□□□□ 0.08
ZNF554Q86TJ5 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC15.52■□□□□ 0.08
ZNF554Q86TJ5 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
ZNF554Q86TJ5 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC15.52■□□□□ 0.08
ZNF554Q86TJ5 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
ZNF554Q86TJ5 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
ZNF554Q86TJ5 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
ZNF554Q86TJ5 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
ZNF554Q86TJ5 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC15.52■□□□□ 0.08
ZNF554Q86TJ5 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
ZNF554Q86TJ5 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
ZNF554Q86TJ5 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
ZNF554Q86TJ5 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
ZNF554Q86TJ5 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
ZNF554Q86TJ5 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC15.52■□□□□ 0.08
ZNF554Q86TJ5 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
ZNF554Q86TJ5 KRT18P29-201ENST00000397031 1267 ntBASIC15.52■□□□□ 0.08
ZNF554Q86TJ5 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC15.52■□□□□ 0.08
ZNF554Q86TJ5 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC15.52■□□□□ 0.08
ZNF554Q86TJ5 CA15P1-201ENST00000481698 905 ntBASIC15.52■□□□□ 0.08
ZNF554Q86TJ5 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC15.52■□□□□ 0.08
ZNF554Q86TJ5 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC15.52■□□□□ 0.08
ZNF554Q86TJ5 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
ZNF554Q86TJ5 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
ZNF554Q86TJ5 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC15.52■□□□□ 0.07
ZNF554Q86TJ5 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
ZNF554Q86TJ5 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC15.52■□□□□ 0.07
ZNF554Q86TJ5 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC15.52■□□□□ 0.07
ZNF554Q86TJ5 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC15.52■□□□□ 0.07
ZNF554Q86TJ5 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC15.52■□□□□ 0.07
ZNF554Q86TJ5 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
ZNF554Q86TJ5 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC15.52■□□□□ 0.07
ZNF554Q86TJ5 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.07
ZNF554Q86TJ5 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
ZNF554Q86TJ5 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
ZNF554Q86TJ5 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
ZNF554Q86TJ5 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
ZNF554Q86TJ5 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC15.52■□□□□ 0.07
ZNF554Q86TJ5 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
ZNF554Q86TJ5 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
ZNF554Q86TJ5 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
ZNF554Q86TJ5 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
ZNF554Q86TJ5 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
ZNF554Q86TJ5 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC15.51■□□□□ 0.07
ZNF554Q86TJ5 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
ZNF554Q86TJ5 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
ZNF554Q86TJ5 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
ZNF554Q86TJ5 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
ZNF554Q86TJ5 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
ZNF554Q86TJ5 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC15.51■□□□□ 0.07
ZNF554Q86TJ5 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
ZNF554Q86TJ5 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
ZNF554Q86TJ5 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
ZNF554Q86TJ5 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
ZNF554Q86TJ5 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC15.51■□□□□ 0.07
ZNF554Q86TJ5 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
ZNF554Q86TJ5 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC15.51■□□□□ 0.07
ZNF554Q86TJ5 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
ZNF554Q86TJ5 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC15.51■□□□□ 0.07
ZNF554Q86TJ5 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
ZNF554Q86TJ5 AC011506.1-201ENST00000474329 610 ntBASIC15.51■□□□□ 0.07
ZNF554Q86TJ5 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC15.51■□□□□ 0.07
ZNF554Q86TJ5 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
ZNF554Q86TJ5 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
ZNF554Q86TJ5 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC15.51■□□□□ 0.07
ZNF554Q86TJ5 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
ZNF554Q86TJ5 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
ZNF554Q86TJ5 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
ZNF554Q86TJ5 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC15.51■□□□□ 0.07
ZNF554Q86TJ5 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
ZNF554Q86TJ5 AC015656.1-201ENST00000624209 3578 ntBASIC15.51■□□□□ 0.07
ZNF554Q86TJ5 AC013268.4-201ENST00000637413 2228 ntBASIC15.51■□□□□ 0.07
ZNF554Q86TJ5 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC15.51■□□□□ 0.07
ZNF554Q86TJ5 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
ZNF554Q86TJ5 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
ZNF554Q86TJ5 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
ZNF554Q86TJ5 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
ZNF554Q86TJ5 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
ZNF554Q86TJ5 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC15.5■□□□□ 0.07
ZNF554Q86TJ5 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms