Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC14.07□□□□□ -0.16
VPS13CQ709C8 ARL16-202ENST00000570561 768 ntTSL 2 BASIC14.07□□□□□ -0.16
VPS13CQ709C8 GPER1-207ENST00000619052 571 ntTSL 2 BASIC14.07□□□□□ -0.16
VPS13CQ709C8 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC14.07□□□□□ -0.16
VPS13CQ709C8 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
VPS13CQ709C8 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC14.07□□□□□ -0.16
VPS13CQ709C8 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
VPS13CQ709C8 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC14.07□□□□□ -0.16
VPS13CQ709C8 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
VPS13CQ709C8 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC14.07□□□□□ -0.16
VPS13CQ709C8 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC14.07□□□□□ -0.16
VPS13CQ709C8 KRT17P7-201ENST00000451704 1104 ntBASIC14.07□□□□□ -0.16
VPS13CQ709C8 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
VPS13CQ709C8 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
VPS13CQ709C8 MIR4259-201ENST00000584466 101 ntBASIC14.07□□□□□ -0.16
VPS13CQ709C8 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
VPS13CQ709C8 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
VPS13CQ709C8 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC14.07□□□□□ -0.16
VPS13CQ709C8 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
VPS13CQ709C8 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC14.07□□□□□ -0.16
VPS13CQ709C8 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
VPS13CQ709C8 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC14.07□□□□□ -0.16
VPS13CQ709C8 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC14.07□□□□□ -0.16
VPS13CQ709C8 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC14.07□□□□□ -0.16
VPS13CQ709C8 SATB1-217ENST00000493952 626 ntTSL 3 BASIC14.07□□□□□ -0.16
VPS13CQ709C8 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
VPS13CQ709C8 REEP4-207ENST00000523293 913 ntTSL 3 BASIC14.07□□□□□ -0.16
VPS13CQ709C8 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
VPS13CQ709C8 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
VPS13CQ709C8 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC14.07□□□□□ -0.16
VPS13CQ709C8 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
VPS13CQ709C8 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
VPS13CQ709C8 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC14.07□□□□□ -0.16
VPS13CQ709C8 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC14.07□□□□□ -0.16
VPS13CQ709C8 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC14.07□□□□□ -0.16
VPS13CQ709C8 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC14.06□□□□□ -0.16
VPS13CQ709C8 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC14.06□□□□□ -0.16
VPS13CQ709C8 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC14.06□□□□□ -0.16
VPS13CQ709C8 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC14.06□□□□□ -0.16
VPS13CQ709C8 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
VPS13CQ709C8 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC14.06□□□□□ -0.16
VPS13CQ709C8 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
VPS13CQ709C8 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
VPS13CQ709C8 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
VPS13CQ709C8 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
VPS13CQ709C8 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
VPS13CQ709C8 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC14.06□□□□□ -0.16
VPS13CQ709C8 LY6E-204ENST00000519546 971 ntTSL 2 BASIC14.06□□□□□ -0.16
VPS13CQ709C8 FUZ-207ENST00000526575 482 ntTSL 4 BASIC14.06□□□□□ -0.16
VPS13CQ709C8 GPR182-203ENST00000622922 591 ntBASIC14.06□□□□□ -0.16
VPS13CQ709C8 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC14.06□□□□□ -0.16
VPS13CQ709C8 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC14.06□□□□□ -0.16
VPS13CQ709C8 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
VPS13CQ709C8 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
VPS13CQ709C8 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
VPS13CQ709C8 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
VPS13CQ709C8 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC14.06□□□□□ -0.16
VPS13CQ709C8 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC14.06□□□□□ -0.16
VPS13CQ709C8 MYCLP1-201ENST00000372451 1075 ntBASIC14.06□□□□□ -0.16
VPS13CQ709C8 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
VPS13CQ709C8 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
VPS13CQ709C8 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
VPS13CQ709C8 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
VPS13CQ709C8 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
VPS13CQ709C8 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC14.06□□□□□ -0.16
VPS13CQ709C8 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC14.06□□□□□ -0.16
VPS13CQ709C8 RAB34-223ENST00000636154 730 ntTSL 2 BASIC14.06□□□□□ -0.16
VPS13CQ709C8 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC14.06□□□□□ -0.16
VPS13CQ709C8 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
VPS13CQ709C8 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
VPS13CQ709C8 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC14.06□□□□□ -0.16
VPS13CQ709C8 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC14.06□□□□□ -0.16
VPS13CQ709C8 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
VPS13CQ709C8 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
VPS13CQ709C8 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC14.06□□□□□ -0.16
VPS13CQ709C8 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
VPS13CQ709C8 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
VPS13CQ709C8 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
VPS13CQ709C8 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
VPS13CQ709C8 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
VPS13CQ709C8 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
VPS13CQ709C8 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
VPS13CQ709C8 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC14.05□□□□□ -0.16
VPS13CQ709C8 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC14.05□□□□□ -0.16
VPS13CQ709C8 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
VPS13CQ709C8 AC008267.7-201ENST00000624570 1194 ntBASIC14.05□□□□□ -0.16
VPS13CQ709C8 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC14.05□□□□□ -0.16
VPS13CQ709C8 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
VPS13CQ709C8 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
VPS13CQ709C8 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
VPS13CQ709C8 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
VPS13CQ709C8 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC14.05□□□□□ -0.16
VPS13CQ709C8 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
VPS13CQ709C8 AC106820.2-201ENST00000563775 3264 ntBASIC14.05□□□□□ -0.16
VPS13CQ709C8 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC14.05□□□□□ -0.16
VPS13CQ709C8 AL139099.5-201ENST00000635274 300 ntBASIC14.05□□□□□ -0.16
VPS13CQ709C8 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
VPS13CQ709C8 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC14.05□□□□□ -0.16
VPS13CQ709C8 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
VPS13CQ709C8 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms